Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G278800.1 | Wheat | cytosol, golgi, peroxisome | 99.41 | 99.41 |
| TraesCS4B01G280300.1 | Wheat | cytosol, golgi, peroxisome | 98.82 | 98.82 |
| Os03t0356484-01 | Rice | cytosol, golgi, peroxisome | 88.17 | 86.13 |
| Zm00001d047461_P001 | Maize | extracellular, mitochondrion | 82.25 | 81.76 |
| OQU92576 | Sorghum | cytosol, golgi, peroxisome | 80.47 | 80.0 |
| HORVU4Hr1G074140.2 | Barley | plastid | 94.08 | 73.95 |
| TraesCS1A01G239800.1 | Wheat | plastid | 66.27 | 68.29 |
| GSMUA_Achr5P08180_001 | Banana | unclear | 64.5 | 66.46 |
| Solyc11g065100.1.1 | Tomato | plastid | 62.13 | 61.76 |
| AT3G57090.2 | Thale cress | cytosol | 62.13 | 61.76 |
| CDY35339 | Canola | cytosol | 60.35 | 61.08 |
| PGSC0003DMT400080258 | Potato | cytosol, nucleus, peroxisome | 60.95 | 60.59 |
| CDX77006 | Canola | cytosol | 59.17 | 59.88 |
| VIT_08s0007g05550.t01 | Wine grape | cytosol | 58.58 | 59.28 |
| Bra034268.1-P | Field mustard | cytosol | 36.69 | 59.05 |
| Solyc12g099770.1.1 | Tomato | cytosol, nucleus, peroxisome | 57.99 | 58.68 |
| PGSC0003DMT400011821 | Potato | cytosol, nucleus, peroxisome | 57.99 | 58.68 |
| Bra007301.1-P | Field mustard | cytosol | 58.58 | 58.24 |
| KRH66798 | Soybean | cytosol, nucleus, peroxisome | 57.4 | 58.08 |
| VIT_06s0009g03660.t01 | Wine grape | cytosol, nucleus, peroxisome | 56.8 | 57.48 |
| KRH73559 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 56.21 | 55.88 |
| KRH14565 | Soybean | cytosol | 55.62 | 55.29 |
| VIT_08s0007g05560.t01 | Wine grape | cytosol | 54.44 | 54.76 |
| PGSC0003DMT400020987 | Potato | cytosol, nucleus, peroxisome | 53.25 | 53.89 |
| CDX97191 | Canola | extracellular | 54.44 | 53.8 |
| CDX69682 | Canola | cytosol, nucleus, peroxisome | 54.44 | 53.49 |
| Bra008891.1-P | Field mustard | cytosol | 53.85 | 53.22 |
| KRG95120 | Soybean | cytosol, nucleus, peroxisome | 56.8 | 53.04 |
| CDX91164 | Canola | cytosol | 53.25 | 52.94 |
| Bra023375.1-P | Field mustard | cytosol | 52.66 | 52.66 |
| CDX85689 | Canola | cytosol, golgi, peroxisome | 52.66 | 52.35 |
| Solyc10g079550.1.1 | Tomato | plastid | 53.25 | 52.33 |
| AT5G12390.1 | Thale cress | cytosol | 49.7 | 50.3 |
| CDX72070 | Canola | endoplasmic reticulum, golgi, plasma membrane | 58.58 | 40.24 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.6.2.2 | InterPro:Fis1 | InterPro:Fis1_TPR_C | InterPro:Fis1_TPR_N | InterPro:Fis1_cytosol |
| GO:GO:0000266 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | InterPro:IPR011990 | PFAM:PF14852 | PFAM:PF14853 | PIRSF:PIRSF008835 | PANTHER:PTHR13247 |
| PANTHER:PTHR13247:SF2 | SUPFAM:SSF48452 | TMHMM:TMhelix | InterPro:TPR-like_helical_dom_sf | EnsemblPlantsGene:TraesCS4A01G023200 | EnsemblPlants:TraesCS4A01G023200.1 |
| TIGR:cd12212 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:16497744..16500972
Molecular Weight (calculated)
18644.3 Da
IEP (calculated)
6.270
GRAVY (calculated)
-0.297
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGHVGQFFQ SVSSIFRGSD TLPVCDRDII AGCETEVAEA ANEEQKNDSL MRLSWALVHS RQPEDVNRGI GMLEASFGKS NSPLQTREKL YLLAVGHYRN
101: GDYTRSRELL ERCLEVQPDW RQALTLERLL EEKTKRDGMI GMAIVTGAFG LVGLVAGGII AAASSSRKK
101: GDYTRSRELL ERCLEVQPDW RQALTLERLL EEKTKRDGMI GMAIVTGAFG LVGLVAGGII AAASSSRKK
001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK
Arabidopsis Description
FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.