Factsheet for Os03t0356484-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 1
cytosol 2
peroxisome 2
plastid 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047461_P001	Maize	extracellular, mitochondrion	87.28	88.82
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	86.13	88.17
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	86.13	88.17
OQU92576	Sorghum	cytosol, golgi, peroxisome	86.13	87.65
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	85.55	87.57
Os05t0383000-01	Rice	cytosol	68.79	72.56
GSMUA_Achr5P08180_001	Banana	unclear	67.05	70.73
HORVU4Hr1G074140.2	Barley	plastid	83.24	66.98
Os01t0951800-01	Rice	plasma membrane	62.43	66.26
CDY35339	Canola	cytosol	62.43	64.67
AT3G57090.2	Thale cress	cytosol	63.01	64.12
Solyc11g065100.1.1	Tomato	plastid	62.43	63.53
VIT_08s0007g05550.t01	Wine grape	cytosol	61.27	63.47
CDX77006	Canola	cytosol	61.27	63.47
PGSC0003DMT400080258	Potato	cytosol, nucleus, peroxisome	61.27	62.35
KRH66798	Soybean	cytosol, nucleus, peroxisome	60.12	62.28
Bra034268.1-P	Field mustard	cytosol	37.57	61.9
Bra007301.1-P	Field mustard	cytosol	60.69	61.76
PGSC0003DMT400011821	Potato	cytosol, nucleus, peroxisome	58.96	61.08
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	58.96	61.08
VIT_06s0009g03660.t01	Wine grape	cytosol, nucleus, peroxisome	58.38	60.48
VIT_08s0007g05560.t01	Wine grape	cytosol	57.23	58.93
KRG95120	Soybean	cytosol, nucleus, peroxisome	59.54	56.91
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	55.49	56.47
KRH14565	Soybean	cytosol	55.49	56.47
PGSC0003DMT400020987	Potato	cytosol, nucleus, peroxisome	53.18	55.09
CDX97191	Canola	extracellular	54.34	54.97
Solyc10g079550.1.1	Tomato	plastid	54.34	54.65
CDX69682	Canola	cytosol, nucleus, peroxisome	54.34	54.65
Bra008891.1-P	Field mustard	cytosol	53.76	54.39
CDX91164	Canola	cytosol	52.6	53.53
Bra023375.1-P	Field mustard	cytosol	52.02	53.25
CDX85689	Canola	cytosol, golgi, peroxisome	52.02	52.94
AT5G12390.1	Thale cress	cytosol	49.71	51.5
CDX72070	Canola	endoplasmic reticulum, golgi, plasma membrane	60.69	42.68

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	EntrezGene:9266461	ProteinID:ABF96021.1	EMBL:AK105146	ProteinID:BAH92150.1
ProteinID:BAS84241.1	ncoils:Coil	InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol
GO:GO:0000266	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016559	InterPro:IPR011990	EnsemblPlantsGene:Os03g0356484
EnsemblPlants:Os03t0356484-01	PFAM:PF14852	PFAM:PF14853	PIRSF:PIRSF008835	PANTHER:PTHR13247	PANTHER:PTHR13247:SF2
UniProt:Q10L89	SUPFAM:SSF48452	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0000DB4DAC	RefSeq:XP_015628648.1
SEG:seg	:	:	:	:	:

Description

Tetratricopeptide-like helical domain containing protein. (Os03t0356484-01)

Coordinates

chr3:-:13659659..13662772

Molecular Weight (calculated)

19096.8 Da

IEP (calculated)

7.442

GRAVY (calculated)

-0.334

Length

173 amino acids

Sequence
(BLAST)

001: MDSHVGKLFD SVGSIFRGSD TLPWCDRDII AGCENEVAEA ANEEQKNESL MRLSWALVHS RQPEDVNRGI GMLQASLDRS TSPLQTREKL YLLAVGHYRT
101: GDYTRSRQLL ERCLEIQPDW RQALTLQRLV EDKTRRDGMI GMAIVTGAFG LVGLVAGGII AAASSSSSSS RKK

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.