CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034268.1-P	Field mustard	cytosol	61.68	98.1
CDY35339	Canola	cytosol	97.6	97.6
VIT_08s0007g05550.t01	Wine grape	cytosol	77.25	77.25
KRH66798	Soybean	cytosol, nucleus, peroxisome	73.05	73.05
VIT_08s0007g05560.t01	Wine grape	cytosol	71.86	71.43
TraesCS1A01G239800.1	Wheat	plastid	68.26	69.51
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	68.26	69.51
TraesCS1D01G240000.1	Wheat	cytosol, golgi, peroxisome	68.26	69.51
GSMUA_Achr5P08180_001	Banana	unclear	67.66	68.9
Os05t0383000-01	Rice	cytosol	67.66	68.9
Zm00001d009978_P001	Maize	plastid	65.87	67.07
KRG95120	Soybean	cytosol, nucleus, peroxisome	72.46	66.85
EES19450	Sorghum	cytosol, nucleus, peroxisome	63.47	65.03
Os01t0951800-01	Rice	plasma membrane	63.47	65.03
PGSC0003DMT400020987	Potato	cytosol, nucleus, peroxisome	64.07	64.07
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	63.47	61.27
Solyc10g079550.1.1	Tomato	plastid	62.28	60.47
CDX97191	Canola	extracellular	61.08	59.65
CDX69682	Canola	cytosol, nucleus, peroxisome	61.08	59.3
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	59.88	59.17
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	59.88	59.17
CDX85689	Canola	cytosol, golgi, peroxisome	59.88	58.82
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	59.28	58.58
CDX91164	Canola	cytosol	59.28	58.24
OQU92576	Sorghum	cytosol, golgi, peroxisome	58.68	57.65
Zm00001d047461_P001	Maize	extracellular, mitochondrion	58.68	57.65
CDX72070	Canola	endoplasmic reticulum, golgi, plasma membrane	74.25	50.41
HORVU4Hr1G074140.2	Barley	plastid	59.88	46.51

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	GO:A0A078CII4	EnsemblPlants:CDX77006	ProteinID:CDX77006	ProteinID:CDX77006.1
InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol	GO:GO:0000266	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005741	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016559	EnsemblPlantsGene:GSBRNA2T00127569001	InterPro:IPR011990	PFAM:PF14852	PFAM:PF14853
PIRSF:PIRSF008835	PANTHER:PTHR13247	PANTHER:PTHR13247:SF9	SUPFAM:SSF48452	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf
UniParc:UPI0004EB632C	SEG:seg	:	:	:	:

Description

BnaC04g38010D

Coordinates

chrLK031809:-:439001..440204

Molecular Weight (calculated)

18444.1 Da

IEP (calculated)

6.003

GRAVY (calculated)

-0.299

Length

167 amino acids

Sequence
(BLAST)

001: MDSKMGNFFD SIGSFFSGGD KIPWCDREVI LECEKEVKTA TDGDSEDQKK ESIMRLSWSL VHSRQAEDIQ RGIAMLEASL ATSSPPLQDR EKIYLLAVGY
101: YRTGDYSRSR QLVERCLEVQ PDWRQALALK KTIEDKIAKD GVIGIGITAT AVGLIAGGIA AALARKK

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.