CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008891.1-P	Field mustard	cytosol	97.67	98.25
CDX97191	Canola	extracellular	97.09	97.66
CDX91164	Canola	cytosol	88.37	89.41
CDX85689	Canola	cytosol, golgi, peroxisome	86.63	87.65
AT5G12390.1	Thale cress	cytosol	79.65	82.04
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	63.37	65.27
PGSC0003DMT400011821	Potato	cytosol, nucleus, peroxisome	63.37	65.27
CDY35339	Canola	cytosol	61.05	62.87
VIT_06s0009g03660.t01	Wine grape	cytosol, nucleus, peroxisome	61.05	62.87
PGSC0003DMT400080258	Potato	cytosol, nucleus, peroxisome	61.05	61.76
GSMUA_Achr5P08180_001	Banana	unclear	58.72	61.59
Solyc11g065100.1.1	Tomato	plastid	60.47	61.18
CDX77006	Canola	cytosol	59.3	61.08
TraesCS1D01G240000.1	Wheat	cytosol, golgi, peroxisome	58.14	60.98
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	58.14	60.98
TraesCS1A01G239800.1	Wheat	plastid	58.14	60.98
Os05t0383000-01	Rice	cytosol	56.4	59.15
Zm00001d009978_P001	Maize	plastid	54.07	56.71
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	55.81	56.47
KRH14565	Soybean	cytosol	55.81	56.47
Os01t0951800-01	Rice	plasma membrane	53.49	56.44
EES19450	Sorghum	cytosol, nucleus, peroxisome	51.74	54.6
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	53.49	54.44
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	53.49	54.44
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	53.49	54.44
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	54.65	54.34
OQU92576	Sorghum	cytosol, golgi, peroxisome	52.33	52.94
Zm00001d047461_P001	Maize	extracellular, mitochondrion	52.33	52.94
HORVU4Hr1G074140.2	Barley	plastid	52.91	42.33
CDX72070	Canola	endoplasmic reticulum, golgi, plasma membrane	58.14	40.65

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	GO:A0A078BZ85	EnsemblPlants:CDX69682	ProteinID:CDX69682	ProteinID:CDX69682.1
InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol	GO:GO:0000266	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:GSBRNA2T00135710001
InterPro:IPR011990	InterPro:IPR019734	PFAM:PF14852	PFAM:PF14853	PIRSF:PIRSF008835	PFscan:PS50005
PANTHER:PTHR13247	PANTHER:PTHR13247:SF9	SUPFAM:SSF48452	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI0004EF2B26	SEG:seg	:	:	:	:

Description

BnaA10g20310D

Coordinates

chrLK031790:+:1387701..1388833

Molecular Weight (calculated)

18651.4 Da

IEP (calculated)

4.739

GRAVY (calculated)

-0.000

Length

172 amino acids

Sequence
(BLAST)

001: MDATIGKVFD SVSTFFSGVA SGSSDEFPLC DTDIISGCEK ELAEAQKGQD EGFKKESIMR LSWALVHSKM PPDIQRGIAM LEGSVVSDTS PITLREKLYL
101: LAIGYYRSGD FSRSRDYIER CLEVEPEWRQ AQTLKTAIED RIVKADGVIG VGIAVTAVGI VAGIAAALVR RG

Best Arabidopsis Sequence Match ( AT5G12390.1 )
(BLAST)

001: MDAAIGKVFD SVSDFFSGAA SASADEFPLC DSDIISGCEK ELAEAQDEGR KKECIMRLSW ALVHSKMPSD IQRGIAMLEA LVVNDTSAMK LREKLYLLAL
101: GYYRSGDFSR SRDCIERCLE VEPESGQAQA LKKAIEDRIV KDGVIGVGIA VTAVGVVAGI AAAILRS

Arabidopsis Description

FIS1BMitochondrial fission 1 protein [Source:UniProtKB/TrEMBL;Acc:A0A178U9A0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.