Factsheet for VIT_06s0009g03660.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	82.63	82.63
PGSC0003DMT400011821	Potato	cytosol, nucleus, peroxisome	82.63	82.63
PGSC0003DMT400080258	Potato	cytosol, nucleus, peroxisome	79.64	78.24
Solyc11g065100.1.1	Tomato	plastid	79.04	77.65
VIT_08s0007g05550.t01	Wine grape	cytosol	74.25	74.25
GSMUA_Achr5P08180_001	Banana	unclear	71.26	72.56
Os05t0383000-01	Rice	cytosol	70.66	71.95
VIT_08s0007g05560.t01	Wine grape	cytosol	70.06	69.64
KRH14565	Soybean	cytosol	69.46	68.24
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	69.46	68.24
Os01t0951800-01	Rice	plasma membrane	66.47	68.1
TraesCS1D01G240000.1	Wheat	cytosol, golgi, peroxisome	66.47	67.68
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	66.47	67.68
TraesCS1A01G239800.1	Wheat	plastid	66.47	67.68
EES19450	Sorghum	cytosol, nucleus, peroxisome	63.47	65.03
Zm00001d009978_P001	Maize	plastid	62.87	64.02
CDX91164	Canola	cytosol	64.07	62.94
Bra023375.1-P	Field mustard	cytosol	63.47	62.72
CDX85689	Canola	cytosol, golgi, peroxisome	63.47	62.35
Bra008891.1-P	Field mustard	cytosol	63.47	61.99
CDX97191	Canola	extracellular	62.87	61.4
AT5G12390.1	Thale cress	cytosol	61.08	61.08
CDX69682	Canola	cytosol, nucleus, peroxisome	62.87	61.05
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	60.48	58.38
Zm00001d047461_P001	Maize	extracellular, mitochondrion	58.68	57.65
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	57.48	56.8
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	57.48	56.8
OQU92576	Sorghum	cytosol, golgi, peroxisome	57.48	56.47
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	56.89	56.21
HORVU4Hr1G074140.2	Barley	plastid	55.69	43.26

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100251692	wikigene:100251692	MapMan:13.6.2.2	ProteinID:CBI24220	ProteinID:CBI24220.3
UniProt:D7T141	EMBL:FN595504	InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol
GO:GO:0000266	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0005777	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016559	InterPro:IPR011990
EntrezGene:LOC100251692	wikigene:LOC100251692	PFAM:PF14852	PFAM:PF14853	PIRSF:PIRSF008835	PANTHER:PTHR13247
PANTHER:PTHR13247:SF9	SUPFAM:SSF48452	TIGR:TC61177	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00015CA1F2
ArrayExpress:VIT_06s0009g03660	EnsemblPlantsGene:VIT_06s0009g03660	EnsemblPlants:VIT_06s0009g03660.t01	RefSeq:XP_002279516	RefSeq:XP_002279516.2	RefSeq:XP_010651496.1
SEG:seg	:	:	:	:	:

Description

Mitochondrial fission 1 protein [Source:UniProtKB/TrEMBL;Acc:D7T141]

Coordinates

chr6:+:16920834..16923677

Molecular Weight (calculated)

18149.9 Da

IEP (calculated)

7.825

GRAVY (calculated)

-0.134

Length

167 amino acids

Sequence
(BLAST)

001: MEAKIGKLLD SVGNFFTGAD QIPWCDGDIV AGCEREVAEA GKGSSDELKS DCIMRLSWAL VHSRRPEDVQ RGIAMLEASL AGTNSPLQKR EKMYLIAVGY
101: YRSGDYSRSR QLVECCLEIA PDWRQAQTLK KTIEDRIKKD GVIGIGIAAT VVGVVVGGIA AAFARKN

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.