Factsheet for Zm00001d009978_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

extracellular: 20408568
plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19450	Sorghum	cytosol, nucleus, peroxisome	85.98	86.5
TraesCS1D01G240000.1	Wheat	cytosol, golgi, peroxisome	79.27	79.27
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	79.27	79.27
TraesCS1A01G239800.1	Wheat	plastid	79.27	79.27
Os05t0383000-01	Rice	cytosol	76.22	76.22
GSMUA_Achr5P08180_001	Banana	unclear	75.0	75.0
VIT_08s0007g05550.t01	Wine grape	cytosol	68.9	67.66
CDY35339	Canola	cytosol	68.29	67.07
KRH66798	Soybean	cytosol, nucleus, peroxisome	67.68	66.47
AT3G57090.2	Thale cress	cytosol	68.29	65.88
Bra007301.1-P	Field mustard	cytosol	68.29	65.88
CDX77006	Canola	cytosol	67.07	65.87
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	65.85	64.67
PGSC0003DMT400011821	Potato	cytosol, nucleus, peroxisome	65.85	64.67
Bra034268.1-P	Field mustard	cytosol	40.85	63.81
Solyc11g065100.1.1	Tomato	plastid	65.85	63.53
PGSC0003DMT400080258	Potato	cytosol, nucleus, peroxisome	65.24	62.94
VIT_06s0009g03660.t01	Wine grape	cytosol, nucleus, peroxisome	64.02	62.87
VIT_08s0007g05560.t01	Wine grape	cytosol	63.41	61.9
KRG95120	Soybean	cytosol, nucleus, peroxisome	67.07	60.77
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	62.8	60.59
Zm00001d047461_P001	Maize	extracellular, mitochondrion	62.8	60.59
KRH14565	Soybean	cytosol	62.2	60.0
PGSC0003DMT400020987	Potato	cytosol, nucleus, peroxisome	60.37	59.28
Solyc10g079550.1.1	Tomato	plastid	60.98	58.14
Bra008891.1-P	Field mustard	cytosol	57.32	54.97
CDX97191	Canola	extracellular	56.71	54.39
CDX69682	Canola	cytosol, nucleus, peroxisome	56.71	54.07
Bra023375.1-P	Field mustard	cytosol	55.49	53.85
CDX91164	Canola	cytosol	55.49	53.53
CDX85689	Canola	cytosol, golgi, peroxisome	55.49	53.53
AT5G12390.1	Thale cress	cytosol	54.27	53.29
CDX72070	Canola	endoplasmic reticulum, golgi, plasma membrane	68.29	45.53

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	ProteinID:AQK93178.1	InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N
InterPro:Fis1_cytosol	GO:GO:0000266	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016559	InterPro:IPR011990
UniProt:K7VET8	PFAM:PF14852	PFAM:PF14853	PIRSF:PIRSF008835	PANTHER:PTHR13247	PANTHER:PTHR13247:SF9
SUPFAM:SSF48452	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002209A9C	EnsemblPlantsGene:Zm00001d009978	EnsemblPlants:Zm00001d009978_P001
EnsemblPlants:Zm00001d009978_T001	SEG:seg	:	:	:	:

Description

Mitochondrial fission 1 protein A

Coordinates

chr8:+:93224718..93232598

Molecular Weight (calculated)

18074.7 Da

IEP (calculated)

7.347

GRAVY (calculated)

-0.153

Length

164 amino acids

Sequence
(BLAST)

001: MEAKMGRFFE SVSNFFTGGD HIPWCDRDLI AGCEGELVNA VNEEQRNESL MRLSWALVHS RQTDDVNRGI SMLQASLDNS ASPLQTREKL YLLAVGFYRI
101: GDYSKSRQLA DRCLEIQADW RQAISLKKAI EDKIAKDGLI GIGIATTAVG LLVGGIAAAV ARKK

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.