Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007301.1-P | Field mustard | cytosol | 86.47 | 86.47 |
| VIT_08s0007g05550.t01 | Wine grape | cytosol | 71.18 | 72.46 |
| GSMUA_Achr5P08180_001 | Banana | unclear | 68.24 | 70.73 |
| TraesCS1D01G240000.1 | Wheat | cytosol, golgi, peroxisome | 67.06 | 69.51 |
| TraesCS1B01G252000.1 | Wheat | cytosol, golgi, peroxisome | 67.06 | 69.51 |
| TraesCS1A01G239800.1 | Wheat | plastid | 67.06 | 69.51 |
| Zm00001d009978_P001 | Maize | plastid | 65.88 | 68.29 |
| VIT_08s0007g05560.t01 | Wine grape | cytosol | 67.06 | 67.86 |
| Os05t0383000-01 | Rice | cytosol | 65.29 | 67.68 |
| KRH66798 | Soybean | cytosol, nucleus, peroxisome | 66.47 | 67.66 |
| EES19450 | Sorghum | cytosol, nucleus, peroxisome | 62.94 | 65.64 |
| Os01t0951800-01 | Rice | plasma membrane | 62.35 | 65.03 |
| Os03t0356484-01 | Rice | cytosol, golgi, peroxisome | 64.12 | 63.01 |
| PGSC0003DMT400020987 | Potato | cytosol, nucleus, peroxisome | 61.18 | 62.28 |
| TraesCS4A01G023200.1 | Wheat | cytosol, golgi, peroxisome | 61.76 | 62.13 |
| TraesCS4D01G278800.1 | Wheat | cytosol, golgi, peroxisome | 61.76 | 62.13 |
| KRG95120 | Soybean | cytosol, nucleus, peroxisome | 65.88 | 61.88 |
| Zm00001d047461_P001 | Maize | extracellular, mitochondrion | 61.76 | 61.76 |
| TraesCS4B01G280300.1 | Wheat | cytosol, golgi, peroxisome | 61.18 | 61.54 |
| Solyc10g079550.1.1 | Tomato | plastid | 61.18 | 60.47 |
| OQU92576 | Sorghum | cytosol, golgi, peroxisome | 60.0 | 60.0 |
| CDX72070 | Canola | endoplasmic reticulum, golgi, plasma membrane | 85.88 | 59.35 |
| AT5G12390.1 | Thale cress | cytosol | 55.88 | 56.89 |
| HORVU4Hr1G074140.2 | Barley | plastid | 60.59 | 47.91 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.6.2.2 | EntrezGene:824876 | EMBL:AB195717 | ProteinID:AEE79613.1 | ProteinID:ANM65072.1 |
| ArrayExpress:AT3G57090 | EnsemblPlantsGene:AT3G57090 | RefSeq:AT3G57090 | TAIR:AT3G57090 | RefSeq:AT3G57090-TAIR-G | EnsemblPlants:AT3G57090.2 |
| EMBL:AY050354 | EMBL:AY087545 | EMBL:AY097397 | Symbol:BIGYIN | ProteinID:CAB72179.1 | InterPro:Fis1 |
| InterPro:Fis1_TPR_C | InterPro:Fis1_TPR_N | InterPro:Fis1_cytosol | GO:GO:0000266 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005741 | GO:GO:0005777 | GO:GO:0005778 | GO:GO:0007005 | GO:GO:0007031 | GO:GO:0008150 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016559 | InterPro:IPR011990 | RefSeq:NP_001327069.1 | RefSeq:NP_567044.1 | PFAM:PF14852 | PFAM:PF14853 |
| PIRSF:PIRSF008835 | PANTHER:PTHR13247 | PANTHER:PTHR13247:SF9 | UniProt:Q9M1J1 | SUPFAM:SSF48452 | TMHMM:TMhelix |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000A36F1 | SEG:seg | : | : | : |
Description
FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
Coordinates
chr3:+:21128396..21131089
Molecular Weight (calculated)
18699.4 Da
IEP (calculated)
5.363
GRAVY (calculated)
-0.185
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.