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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007301.1-P Field mustard cytosol 68.7 99.41
AT3G57090.2 Thale cress cytosol 59.35 85.88
CDY35339 Canola cytosol 51.22 75.45
CDX77006 Canola cytosol 50.41 74.25
VIT_08s0007g05550.t01 Wine grape cytosol 48.37 71.26
GSMUA_Achr5P08180_001 Banana unclear 46.75 70.12
Os05t0383000-01 Rice cytosol 46.34 69.51
TraesCS1D01G240000.1 Wheat cytosol, golgi, peroxisome 45.94 68.9
TraesCS1B01G252000.1 Wheat cytosol, golgi, peroxisome 45.94 68.9
TraesCS1A01G239800.1 Wheat plastid 45.94 68.9
VIT_08s0007g05560.t01 Wine grape cytosol 46.75 68.45
Zm00001d009978_P001 Maize plastid 45.53 68.29
EES19450 Sorghum cytosol, nucleus, peroxisome 45.12 68.1
KRH66798 Soybean cytosol, nucleus, peroxisome 45.53 67.07
Os01t0951800-01 Rice plasma membrane 41.87 63.19
PGSC0003DMT400020987 Potato cytosol, nucleus, peroxisome 42.28 62.28
KRG95120 Soybean cytosol, nucleus, peroxisome 45.12 61.33
Os03t0356484-01 Rice cytosol, golgi, peroxisome 42.68 60.69
Solyc10g079550.1.1 Tomato plastid 41.87 59.88
CDX91164 Canola cytosol 41.06 59.41
CDX85689 Canola cytosol, golgi, peroxisome 40.65 58.82
Zm00001d047461_P001 Maize extracellular, mitochondrion 40.65 58.82
TraesCS4A01G023200.1 Wheat cytosol, golgi, peroxisome 40.24 58.58
TraesCS4D01G278800.1 Wheat cytosol, golgi, peroxisome 40.24 58.58
CDX97191 Canola extracellular 40.65 58.48
CDX69682 Canola cytosol, nucleus, peroxisome 40.65 58.14
TraesCS4B01G280300.1 Wheat cytosol, golgi, peroxisome 39.84 57.99
OQU92576 Sorghum cytosol, golgi, peroxisome 39.43 57.06
HORVU4Hr1G074140.2 Barley plastid 42.68 48.84
Protein Annotations
Gene3D:1.25.40.10MapMan:13.6.2.2GO:A0A078C5F7EnsemblPlants:CDX72070ProteinID:CDX72070ProteinID:CDX72070.1
InterPro:Fis1InterPro:Fis1_TPR_CInterPro:Fis1_TPR_NInterPro:Fis1_cytosolGO:GO:0000266GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0005777GO:GO:0007005GO:GO:0008150GO:GO:0009507GO:GO:0009536
GO:GO:0009987GO:GO:0016043GO:GO:0016559EnsemblPlantsGene:GSBRNA2T00155867001InterPro:IPR011990PFAM:PF14852
PFAM:PF14853PANTHER:PTHR13247PANTHER:PTHR13247:SF9SUPFAM:SSF48452TMHMM:TMhelixInterPro:TPR-like_helical_dom_sf
UniParc:UPI0004EE0CA8SEG:seg::::
Description
BnaC08g28040D
Coordinates
chrLK031795:-:2206378..2210640
Molecular Weight (calculated)
27121.8 Da
IEP (calculated)
7.967
GRAVY (calculated)
-0.139
Length
246 amino acids
Sequence
(BLAST)
001: MSKIEGCDYF TMLNLLGLGL SINFCVAQNL YKISINPNIF QNFSNLSLSK NSMFDFISTG PPVFFCENQK KRKSKEMDAK IGKFFDSVGS FFSGGDKIPW
101: SEGDVIAGCE REVREATNSG NEGLKKECLM RLSWALVHSH QQDDVQRGID MLEASLANSA PPLEDREKLY LLAVGYYRSG DCSKSRQLID RCIEMQPDWR
201: QALVLKKCIE DKITKDGVIG IGITASAVGA VGLIAGGIVA ALARKK
Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)
001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK
Arabidopsis Description
FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.