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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plastid 1
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85689 Canola cytosol, golgi, peroxisome 98.82 98.24
Bra008891.1-P Field mustard cytosol 88.17 87.13
AT5G12390.1 Thale cress cytosol 82.84 83.83
Solyc12g099770.1.1 Tomato cytosol, nucleus, peroxisome 64.5 65.27
PGSC0003DMT400011821 Potato cytosol, nucleus, peroxisome 64.5 65.27
VIT_06s0009g03660.t01 Wine grape cytosol, nucleus, peroxisome 62.72 63.47
Bra034268.1-P Field mustard cytosol 38.46 61.9
PGSC0003DMT400080258 Potato cytosol, nucleus, peroxisome 62.13 61.76
Solyc11g065100.1.1 Tomato plastid 60.95 60.59
Bra007301.1-P Field mustard cytosol 59.76 59.41
TraesCS1D01G240000.1 Wheat cytosol, golgi, peroxisome 57.4 59.15
TraesCS1B01G252000.1 Wheat cytosol, golgi, peroxisome 57.4 59.15
TraesCS1A01G239800.1 Wheat plastid 57.4 59.15
GSMUA_Achr5P08180_001 Banana unclear 56.8 58.54
Os05t0383000-01 Rice cytosol 56.21 57.93
KRH73559 Soybean cytosol, endoplasmic reticulum, peroxisome 56.21 55.88
Zm00001d009978_P001 Maize plastid 53.85 55.49
KRH14565 Soybean cytosol 55.62 55.29
Os01t0951800-01 Rice plasma membrane 53.25 55.21
EES19450 Sorghum cytosol, nucleus, peroxisome 51.48 53.37
TraesCS4A01G023200.1 Wheat cytosol, golgi, peroxisome 52.66 52.66
TraesCS4B01G280300.1 Wheat cytosol, golgi, peroxisome 52.66 52.66
TraesCS4D01G278800.1 Wheat cytosol, golgi, peroxisome 52.66 52.66
Os03t0356484-01 Rice cytosol, golgi, peroxisome 53.25 52.02
Zm00001d047461_P001 Maize extracellular, mitochondrion 50.89 50.59
OQU92576 Sorghum cytosol, golgi, peroxisome 50.3 50.0
HORVU4Hr1G074140.2 Barley plastid 52.07 40.93
Protein Annotations
Gene3D:1.25.40.10MapMan:13.6.2.2EnsemblPlantsGene:Bra023375EnsemblPlants:Bra023375.1EnsemblPlants:Bra023375.1-PInterPro:Fis1
InterPro:Fis1_TPR_CInterPro:Fis1_TPR_NInterPro:Fis1_cytosolGO:GO:0000266GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0005741GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016043
GO:GO:0016559InterPro:IPR011990UniProt:M4E3M2PFAM:PF14852PFAM:PF14853PIRSF:PIRSF008835
PANTHER:PTHR13247PANTHER:PTHR13247:SF9SUPFAM:SSF48452TMHMM:TMhelixInterPro:TPR-like_helical_dom_sfUniParc:UPI000254340A
SEG:seg:::::
Description
AT5G12390 (E=7e-055) FIS1B | FIS1B (FISSION 1B); binding
Coordinates
chrA02:-:3072347..3073208
Molecular Weight (calculated)
18206.8 Da
IEP (calculated)
4.627
GRAVY (calculated)
0.027
Length
169 amino acids
Sequence
(BLAST)
001: MDATIGKVFD SVSGFFSGAA SGSTDEFPLC DTDIISGCEK ELAEAQKGQD EGLKKECIMR LSWALVHSKT HADIQRGISM LEASVVSDTS PMNLREKLYL
101: LALGYYRSSD FSRSRECVER CLEVEPEWGQ AQTLKTAIED RIVKDGVIGV GIAVTAVGVV AGIAAALLR
Best Arabidopsis Sequence Match ( AT5G12390.1 )
(BLAST)
001: MDAAIGKVFD SVSDFFSGAA SASADEFPLC DSDIISGCEK ELAEAQDEGR KKECIMRLSW ALVHSKMPSD IQRGIAMLEA LVVNDTSAMK LREKLYLLAL
101: GYYRSGDFSR SRDCIERCLE VEPESGQAQA LKKAIEDRIV KDGVIGVGIA VTAVGVVAGI AAAILRS
Arabidopsis Description
FIS1BMitochondrial fission 1 protein [Source:UniProtKB/TrEMBL;Acc:A0A178U9A0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.