Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX85689 | Canola | cytosol, golgi, peroxisome | 98.82 | 98.24 |
Bra008891.1-P | Field mustard | cytosol | 88.17 | 87.13 |
AT5G12390.1 | Thale cress | cytosol | 82.84 | 83.83 |
Solyc12g099770.1.1 | Tomato | cytosol, nucleus, peroxisome | 64.5 | 65.27 |
PGSC0003DMT400011821 | Potato | cytosol, nucleus, peroxisome | 64.5 | 65.27 |
VIT_06s0009g03660.t01 | Wine grape | cytosol, nucleus, peroxisome | 62.72 | 63.47 |
Bra034268.1-P | Field mustard | cytosol | 38.46 | 61.9 |
PGSC0003DMT400080258 | Potato | cytosol, nucleus, peroxisome | 62.13 | 61.76 |
Solyc11g065100.1.1 | Tomato | plastid | 60.95 | 60.59 |
Bra007301.1-P | Field mustard | cytosol | 59.76 | 59.41 |
TraesCS1D01G240000.1 | Wheat | cytosol, golgi, peroxisome | 57.4 | 59.15 |
TraesCS1B01G252000.1 | Wheat | cytosol, golgi, peroxisome | 57.4 | 59.15 |
TraesCS1A01G239800.1 | Wheat | plastid | 57.4 | 59.15 |
GSMUA_Achr5P08180_001 | Banana | unclear | 56.8 | 58.54 |
Os05t0383000-01 | Rice | cytosol | 56.21 | 57.93 |
KRH73559 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 56.21 | 55.88 |
Zm00001d009978_P001 | Maize | plastid | 53.85 | 55.49 |
KRH14565 | Soybean | cytosol | 55.62 | 55.29 |
Os01t0951800-01 | Rice | plasma membrane | 53.25 | 55.21 |
EES19450 | Sorghum | cytosol, nucleus, peroxisome | 51.48 | 53.37 |
TraesCS4A01G023200.1 | Wheat | cytosol, golgi, peroxisome | 52.66 | 52.66 |
TraesCS4B01G280300.1 | Wheat | cytosol, golgi, peroxisome | 52.66 | 52.66 |
TraesCS4D01G278800.1 | Wheat | cytosol, golgi, peroxisome | 52.66 | 52.66 |
Os03t0356484-01 | Rice | cytosol, golgi, peroxisome | 53.25 | 52.02 |
Zm00001d047461_P001 | Maize | extracellular, mitochondrion | 50.89 | 50.59 |
OQU92576 | Sorghum | cytosol, golgi, peroxisome | 50.3 | 50.0 |
HORVU4Hr1G074140.2 | Barley | plastid | 52.07 | 40.93 |
Protein Annotations
Gene3D:1.25.40.10 | MapMan:13.6.2.2 | EnsemblPlantsGene:Bra023375 | EnsemblPlants:Bra023375.1 | EnsemblPlants:Bra023375.1-P | InterPro:Fis1 |
InterPro:Fis1_TPR_C | InterPro:Fis1_TPR_N | InterPro:Fis1_cytosol | GO:GO:0000266 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
GO:GO:0005741 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
GO:GO:0016559 | InterPro:IPR011990 | UniProt:M4E3M2 | PFAM:PF14852 | PFAM:PF14853 | PIRSF:PIRSF008835 |
PANTHER:PTHR13247 | PANTHER:PTHR13247:SF9 | SUPFAM:SSF48452 | TMHMM:TMhelix | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000254340A |
SEG:seg | : | : | : | : | : |
Description
AT5G12390 (E=7e-055) FIS1B | FIS1B (FISSION 1B); binding
Coordinates
chrA02:-:3072347..3073208
Molecular Weight (calculated)
18206.8 Da
IEP (calculated)
4.627
GRAVY (calculated)
0.027
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATIGKVFD SVSGFFSGAA SGSTDEFPLC DTDIISGCEK ELAEAQKGQD EGLKKECIMR LSWALVHSKT HADIQRGISM LEASVVSDTS PMNLREKLYL
101: LALGYYRSSD FSRSRECVER CLEVEPEWGQ AQTLKTAIED RIVKDGVIGV GIAVTAVGVV AGIAAALLR
101: LALGYYRSSD FSRSRECVER CLEVEPEWGQ AQTLKTAIED RIVKDGVIGV GIAVTAVGVV AGIAAALLR
001: MDAAIGKVFD SVSDFFSGAA SASADEFPLC DSDIISGCEK ELAEAQDEGR KKECIMRLSW ALVHSKMPSD IQRGIAMLEA LVVNDTSAMK LREKLYLLAL
101: GYYRSGDFSR SRDCIERCLE VEPESGQAQA LKKAIEDRIV KDGVIGVGIA VTAVGVVAGI AAAILRS
101: GYYRSGDFSR SRDCIERCLE VEPESGQAQA LKKAIEDRIV KDGVIGVGIA VTAVGVVAGI AAAILRS
Arabidopsis Description
FIS1BMitochondrial fission 1 protein [Source:UniProtKB/TrEMBL;Acc:A0A178U9A0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.