Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G240200.1 | Wheat | cytosol | 78.81 | 82.72 |
| TraesCS7D01G238200.1 | Wheat | cytosol | 76.18 | 81.01 |
| TraesCS7B01G135800.1 | Wheat | cytosol, golgi, nucleus | 75.66 | 80.3 |
| Os08t0497900-01 | Rice | nucleus | 39.4 | 48.7 |
| HORVU5Hr1G071910.1 | Barley | nucleus | 42.73 | 44.53 |
| EES14314 | Sorghum | nucleus | 34.5 | 38.93 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 28.02 | 26.89 |
| GSMUA_Achr10P... | Banana | cytosol | 23.64 | 26.79 |
| Bra039387.1-P | Field mustard | cytosol, golgi, nucleus, plastid | 18.39 | 26.25 |
| CDY43354 | Canola | cytosol, golgi, nucleus | 17.69 | 25.31 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 26.27 | 25.25 |
| HORVU2Hr1G081800.3 | Barley | cytosol, nucleus | 20.32 | 25.11 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 26.62 | 24.76 |
| CDY24192 | Canola | plastid | 12.96 | 24.42 |
| Solyc07g066170.2.1 | Tomato | nucleus | 14.19 | 24.18 |
| CDX75706 | Canola | cytosol, golgi, nucleus | 17.51 | 23.81 |
| Bra001502.1-P | Field mustard | nucleus, plastid | 18.39 | 23.76 |
| CDX82542 | Canola | plastid | 18.21 | 23.48 |
| PGSC0003DMT400022426 | Potato | nucleus | 23.64 | 23.04 |
| CDX89333 | Canola | nucleus | 19.09 | 22.02 |
| PGSC0003DMT400056956 | Potato | nucleus | 22.77 | 21.74 |
| Bra026434.1-P | Field mustard | nucleus | 18.74 | 21.62 |
| KRH62532 | Soybean | endoplasmic reticulum | 21.89 | 21.37 |
| KRH56393 | Soybean | cytosol | 21.89 | 21.29 |
| CDX94330 | Canola | nucleus | 18.21 | 21.18 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 18.56 | 20.46 |
| AT5G56210.1 | Thale cress | nucleus | 17.86 | 20.04 |
| Bra002835.1-P | Field mustard | cytosol, golgi, nucleus | 9.46 | 19.57 |
| CDY17403 | Canola | nucleus | 9.46 | 19.57 |
| AT4G26455.1 | Thale cress | nucleus | 16.64 | 19.43 |
| CDY32806 | Canola | cytosol, golgi, nucleus | 8.93 | 18.28 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G048940.3 | EnsemblPlantsGene:HORVU7Hr1G048940 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | ncoils:Coil |
| PANTHER:PTHR34562 | PANTHER:PTHR34562:SF4 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B472B48 | UniProt:A0A287WER6 |
| MapMan:20.4.2.1.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:169106321..169109392
Molecular Weight (calculated)
61929.2 Da
IEP (calculated)
5.280
GRAVY (calculated)
-0.575
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: PWKEPPSPAQ PCTPIPTPRA FRLALRRVHS SEMAVTATDM DHIANGAVES SAESPAAEAP LAARTKGRGL RRWRRIQREH RAEGPAAPTT AAGGRGGADD
101: DAAQLQKRRL PLGAAAPPKE RHEVAVEEVE SSTASVESRF VPLEPAPAPA PAKLDPDLGL LVSSIGFSVG SGGADSDNSE DRSSRSSTAA SAPRARDKLR
201: AHTTAAIHGK NHRTVRARAD RPSAHTAFSQ GEAEAQNSRL SVESDRRSSS AVHGRKQGVG SIGIGIHKVH SDGDDRSDEG QPNDEVRSTA GGYCTQSGSS
301: VVGRLGGGND DSGDADVEDT FDEEGVGKRD IGLEMNSCAN PYAESILLLQ RTQEALENEI RNFVLIGKES TDDLEARDDE RSNSLHIEES VEEANEKRKD
401: LDSRIEQASI LIKEKNSRIL ELEALSRTRA WRSAIQSANN LLLQTDLDQL LQEKMEAEIQ CIILTRTSQT WTPVAEDQKA VYEDQKCLLG DYKQLELKLR
501: GAENRAAILR EMVEKLEAQC RELSASAEIL HLQSRTSTAS LLCFIQFILL LIAIGIYVVR LSPSSTEFVP T
101: DAAQLQKRRL PLGAAAPPKE RHEVAVEEVE SSTASVESRF VPLEPAPAPA PAKLDPDLGL LVSSIGFSVG SGGADSDNSE DRSSRSSTAA SAPRARDKLR
201: AHTTAAIHGK NHRTVRARAD RPSAHTAFSQ GEAEAQNSRL SVESDRRSSS AVHGRKQGVG SIGIGIHKVH SDGDDRSDEG QPNDEVRSTA GGYCTQSGSS
301: VVGRLGGGND DSGDADVEDT FDEEGVGKRD IGLEMNSCAN PYAESILLLQ RTQEALENEI RNFVLIGKES TDDLEARDDE RSNSLHIEES VEEANEKRKD
401: LDSRIEQASI LIKEKNSRIL ELEALSRTRA WRSAIQSANN LLLQTDLDQL LQEKMEAEIQ CIILTRTSQT WTPVAEDQKA VYEDQKCLLG DYKQLELKLR
501: GAENRAAILR EMVEKLEAQC RELSASAEIL HLQSRTSTAS LLCFIQFILL LIAIGIYVVR LSPSSTEFVP T
001: MFFFSCVCRI ISSTLIIFVD TASPGNNVGG FLRRTLNSLG FCFSCSSVTQ ASSRWIVLGM NESVPDSVED NGNSVPANGL LVLPDNDHEE GGVGSPQRSN
101: SVESPGGSVH STRKGFGLKK WRRIKRDGPV RDEAAPVDDG SKLLKRGLAG LVNPPSKHVE FSSVEARQSS EGSVGSVNMV HHPGVANGFS PDIGCMFAVG
201: QAFEKSEEHS GNTIGGKNVV GGKVVSGSQE KLWSDTIKRA SEERGDIEKE KPCSSLDSDL RSSDFVFSTG SVSVGNHGEK DERLTMNYIG GFSNEGQVKE
301: EVQTYSRSEN GNKEDDGESK KNNNHWADKD ALADSIRSFA VLQEVLWKEV QSFQELGKES VLLHSNTDEL SSDQPSHQNC KEDNSTSSGS KALILKEKVK
401: LLEHKLEEAR AALEAKEARI QELENSKIES ELECIFQRKI ETEIEHLMLT RSLSSLQVLQ ETKKLHSLKE DPVSNRGNIL GKTCKLGFYI LTQLILLVSI
501: LRFLVLQFSP ASRLVIPT
101: SVESPGGSVH STRKGFGLKK WRRIKRDGPV RDEAAPVDDG SKLLKRGLAG LVNPPSKHVE FSSVEARQSS EGSVGSVNMV HHPGVANGFS PDIGCMFAVG
201: QAFEKSEEHS GNTIGGKNVV GGKVVSGSQE KLWSDTIKRA SEERGDIEKE KPCSSLDSDL RSSDFVFSTG SVSVGNHGEK DERLTMNYIG GFSNEGQVKE
301: EVQTYSRSEN GNKEDDGESK KNNNHWADKD ALADSIRSFA VLQEVLWKEV QSFQELGKES VLLHSNTDEL SSDQPSHQNC KEDNSTSSGS KALILKEKVK
401: LLEHKLEEAR AALEAKEARI QELENSKIES ELECIFQRKI ETEIEHLMLT RSLSSLQVLQ ETKKLHSLKE DPVSNRGNIL GKTCKLGFYI LTQLILLVSI
501: LRFLVLQFSP ASRLVIPT
Arabidopsis Description
WIP3WPP domain interacting protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSR4]
SUBAcon: [extracellular,plasma membrane,vacuole]
SUBAcon: [extracellular,plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.