Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G351300.1 | Wheat | cytosol, golgi, nucleus | 59.52 | 92.28 |
| TraesCS2D01G332000.1 | Wheat | cytosol | 87.23 | 79.02 |
| TraesCS2A01G331000.1 | Wheat | cytosol | 86.36 | 78.24 |
| Zm00001d003334_P001 | Maize | cytosol, nucleus, plastid | 39.18 | 58.77 |
| Os04t0471300-01 | Rice | cytosol, golgi, nucleus | 37.23 | 56.95 |
| OQU81760 | Sorghum | nucleus | 52.16 | 56.57 |
| Zm00001d025667_P001 | Maize | cytosol | 51.95 | 49.18 |
| Bra002835.1-P | Field mustard | cytosol, golgi, nucleus | 14.94 | 25.0 |
| CDY17403 | Canola | nucleus | 14.94 | 25.0 |
| CDY32806 | Canola | cytosol, golgi, nucleus | 14.29 | 23.66 |
| Solyc07g066170.2.1 | Tomato | nucleus | 16.67 | 22.99 |
| CDY24192 | Canola | plastid | 14.5 | 22.11 |
| HORVU5Hr1G071910.1 | Barley | nucleus | 24.89 | 20.99 |
| HORVU7Hr1G048940.3 | Barley | cytosol | 25.11 | 20.32 |
| GSMUA_Achr10P... | Banana | cytosol | 21.64 | 19.84 |
| CDY43354 | Canola | cytosol, golgi, nucleus | 16.45 | 19.05 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 24.46 | 19.02 |
| Bra039387.1-P | Field mustard | cytosol, golgi, nucleus, plastid | 16.45 | 19.0 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 24.03 | 18.66 |
| CDX75706 | Canola | cytosol, golgi, nucleus | 16.88 | 18.57 |
| AT5G56210.1 | Thale cress | nucleus | 20.35 | 18.47 |
| PGSC0003DMT400022426 | Potato | nucleus | 22.94 | 18.09 |
| KRH56393 | Soybean | cytosol | 22.29 | 17.55 |
| Bra001502.1-P | Field mustard | nucleus, plastid | 16.45 | 17.19 |
| CDX89333 | Canola | nucleus | 18.4 | 17.17 |
| CDX82542 | Canola | plastid | 16.45 | 17.16 |
| CDX94330 | Canola | nucleus | 18.18 | 17.11 |
| KRH62532 | Soybean | endoplasmic reticulum | 21.64 | 17.09 |
| Bra026434.1-P | Field mustard | nucleus | 17.97 | 16.77 |
| PGSC0003DMT400056956 | Potato | nucleus | 21.21 | 16.39 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 18.18 | 16.22 |
| AT4G26455.1 | Thale cress | nucleus | 17.1 | 16.16 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 21.43 | 16.12 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G081800.3 | EnsemblPlantsGene:HORVU2Hr1G081800 | ncoils:Coil | PANTHER:PTHR34562 | PANTHER:PTHR34562:SF7 | SEG:seg |
| UniParc:UPI000B4798A6 | UniProt:A0A287IMR9 | MapMan:20.4.2.1.2 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:593519662..593522043
Molecular Weight (calculated)
52279.9 Da
IEP (calculated)
5.065
GRAVY (calculated)
-0.555
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: NHAAWEQNPS GFLPKSPCHD YAVARKLALP CSPTQGKYLV HTSPRKAYRP RRWRRVGREL RVNPLDLDVN FLVLATGYSL GIVSKNLDQR TLCPSFIASK
101: CLVGSVIGSH RNGKRIRVKD FGLGGVGCKT RRWAIRTKGE TSFGESYLMT SDAGDAFSNN RHQTMSMSYD GSQSEDRQSE EVQSAYKKFS AGDEDVIRGF
201: VNLDENEEQN EENEWSWVPQ EEDPLARSAS SLEKAQEVLE KFFKKNDVLE SEMLKLSELG KEFVAEDSHD GNIGFPDIEA DVLGMNQKME CLELKLKEAS
301: DTITEKDSRL SELQSLINSA HTPTLQTETV NTDELETELE SHLQDKIDAE IQCLVMMKAR QNWQARAEDQ IALEEHRVSA GDDTRMLLKL QDTESKIVML
401: KEQVDRLEAH EKELSVTTEI LRMQSKTFKI GLFGLLQLIM LCLSLKMFFA QDSARFGDLV PT
101: CLVGSVIGSH RNGKRIRVKD FGLGGVGCKT RRWAIRTKGE TSFGESYLMT SDAGDAFSNN RHQTMSMSYD GSQSEDRQSE EVQSAYKKFS AGDEDVIRGF
201: VNLDENEEQN EENEWSWVPQ EEDPLARSAS SLEKAQEVLE KFFKKNDVLE SEMLKLSELG KEFVAEDSHD GNIGFPDIEA DVLGMNQKME CLELKLKEAS
301: DTITEKDSRL SELQSLINSA HTPTLQTETV NTDELETELE SHLQDKIDAE IQCLVMMKAR QNWQARAEDQ IALEEHRVSA GDDTRMLLKL QDTESKIVML
401: KEQVDRLEAH EKELSVTTEI LRMQSKTFKI GLFGLLQLIM LCLSLKMFFA QDSARFGDLV PT
001: MDLESESSVL ESVEDNNGLI GDLDKELNSP VETSPLISKG FGLRKWKRRL RRDLVKDDTS VSMENSKALK RVLSGLVDPN AKQMHLPGPE VRQDSVGSVG
101: SVNSVVGFVM GGESYGNGLA FAAGVDSDNS EDRSSTMSHS WDKHRGKVSG GKSVISSGDS SQQRKSSVEK SNKLRGERIK IEKENSHSSM ESADSRSSNF
201: VFMQGASYSL SSREQGGRRM MDYDDENSDH DAHTSKRKDN VEEEEEETED YSQGDCVEES QIKSNGSSDN LDPLIVAVNS FQTLQEALQK ELQKFQELGK
301: EEPITSLHDG GESSSCIHAG HEGASEASSS YRFGSEKMGE MELTSLDSEI LNLVNNVEHL EIKLEEAKRI LEVKETQIRE LESTINVSET CNGGTEIGIE
401: DIFQQKVEAE IEYIIFSRSV GNLKRRIKLI EEEKTLGLSK LDKAETKAEN LKNQAQDLQN HCVEITEIQE VECLKKRAFK TTRCLLLQLG LLFILYYSLL
501: PEPEIAVPT
101: SVNSVVGFVM GGESYGNGLA FAAGVDSDNS EDRSSTMSHS WDKHRGKVSG GKSVISSGDS SQQRKSSVEK SNKLRGERIK IEKENSHSSM ESADSRSSNF
201: VFMQGASYSL SSREQGGRRM MDYDDENSDH DAHTSKRKDN VEEEEEETED YSQGDCVEES QIKSNGSSDN LDPLIVAVNS FQTLQEALQK ELQKFQELGK
301: EEPITSLHDG GESSSCIHAG HEGASEASSS YRFGSEKMGE MELTSLDSEI LNLVNNVEHL EIKLEEAKRI LEVKETQIRE LESTINVSET CNGGTEIGIE
401: DIFQQKVEAE IEYIIFSRSV GNLKRRIKLI EEEKTLGLSK LDKAETKAEN LKNQAQDLQN HCVEITEIQE VECLKKRAFK TTRCLLLQLG LLFILYYSLL
501: PEPEIAVPT
Arabidopsis Description
WIP2WPP domain-interacting protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.