Factsheet for HORVU3Hr1G108010.6

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G076010.1
HORVU2Hr1G091830.4
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G03120.1	HORVU1Hr1G076010.1	AT3G16310.1	21798944
AT2G03120.1	HORVU3Hr1G026980.2	AT3G16310.1	21798944
AT2G03120.1	HORVU3Hr1G071060.1	AT3G16310.1	21798944
AT2G03120.1	HORVU2Hr1G091830.4	AT3G60600.1	21798944
AT2G03120.1	HORVU6Hr1G060760.3	AT3G60600.1	21798944
AT2G03120.1	HORVU7Hr1G071270.2	AT3G60600.1	21798944
AT2G03120.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G492200.1	Wheat	plasma membrane	90.75	91.28
TraesCS3B01G545500.1	Wheat	plasma membrane	90.46	90.99
HORVU6Hr1G009670.1	Barley	plasma membrane	85.55	86.55
Os02t0117400-01	Rice	plasma membrane	83.81	84.55
Os05t0436400-03	Rice	plasma membrane	69.08	83.57
EES04366	Sorghum	golgi, plasma membrane	81.79	82.27
CDX88296	Canola	plasma membrane	69.08	80.74
Zm00001d015006_P004	Maize	plasma membrane	80.35	80.12
KXG37644	Sorghum	plasma membrane	81.5	79.89
GSMUA_Achr5P08750_001	Banana	plasma membrane	78.61	78.84
KRH52673	Soybean	plasma membrane	76.3	77.42
PGSC0003DMT400024446	Potato	plasma membrane	75.14	77.38
Bra017402.1-P	Field mustard	golgi, plasma membrane	34.97	77.07
CDY03017	Canola	plasma membrane	74.57	77.01
VIT_06s0009g03520.t01	Wine grape	plasma membrane	75.72	76.83
CDY45179	Canola	plasma membrane	74.28	76.72
Bra024788.1-P	Field mustard	plasma membrane	74.28	76.72
Solyc01g008820.2.1	Tomato	plasma membrane	74.86	76.63
KRH62014	Soybean	endoplasmic reticulum	75.43	76.54
PGSC0003DMT400058489	Potato	plasma membrane	74.57	76.33
CDY60831	Canola	plasma membrane	73.99	76.19
Solyc11g064790.1.1	Tomato	plasma membrane	74.57	76.11
CDY17419	Canola	plasma membrane	73.7	75.89
AT2G03120.1	Thale cress	plasma membrane	75.14	75.58
Bra026567.1-P	Field mustard	plasma membrane	74.28	74.93
CDY09342	Canola	plasma membrane	74.28	74.93
CDY64408	Canola	plasma membrane	74.28	74.93
KRH16232	Soybean	plasma membrane	73.41	74.49
GSMUA_Achr1P24450_001	Banana	plasma membrane	60.98	69.41
CDY03016	Canola	extracellular, golgi, plasma membrane	23.41	61.83
Zm00001d015005_P002	Maize	plasma membrane	42.2	61.34
Zm00001d054017_P003	Maize	plasma membrane	81.21	51.75
OQU87114	Sorghum	plasma membrane	40.75	39.17
HORVU7Hr1G059420.1	Barley	plasma membrane	29.48	27.42
HORVU3Hr1G093180.1	Barley	golgi, plasma membrane	23.41	14.73
HORVU7Hr1G122650.3	Barley	nucleus, plasma membrane	25.14	14.24
HORVU7Hr1G000380.6	Barley	plasma membrane	21.68	14.02

Protein Annotations

MapMan:18.10.1.4	UniProt:A0A287MLQ5	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G108010	EnsemblPlants:HORVU3Hr1G108010.6	PFAM:PF04258	PFscan:PS51257	PANTHER:PTHR12174
PANTHER:PTHR12174:SF23	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	TMHMM:TMhelix	UniParc:UPI000B488C16
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:673991251..673995327

Molecular Weight (calculated)

38040.3 Da

IEP (calculated)

9.631

GRAVY (calculated)

0.748

Length

346 amino acids

Sequence
(BLAST)

001: MKTHERAANL ALAGLSLAPL VINVNPNLNV ILTACLTVYV GCYRSVKSTP PAETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNTVL TAYFFILGIA
101: ALCATLLPTI KRFLPEGWND NAIVWHAPYF HSLSVEFTKS QVVASVPGFF FCVWYAMKKH WLANNVLGIA FCIQGIEMLS LGSFKTGGIL LAGLFVYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTADAAR PFSMLGLGDI VIPGIFVALA LRFDVSRGIK NRYFNSAFLG YTAGMTATIV VMNWFQAAQP ALLYIVPGVT
301: GFVAVHSLWN GEVKPVRPLT IFQFPTFSFS LNLSVTLTQV ISLLYG

Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)

001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE

Arabidopsis Description

SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.