Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60831 | Canola | plasma membrane | 99.7 | 99.7 |
| CDX88296 | Canola | plasma membrane | 85.71 | 97.3 |
| CDY45179 | Canola | plasma membrane | 95.83 | 96.12 |
| CDY03017 | Canola | plasma membrane | 95.54 | 95.82 |
| CDY64408 | Canola | plasma membrane | 95.54 | 93.59 |
| CDY09342 | Canola | plasma membrane | 95.54 | 93.59 |
| AT2G03120.1 | Thale cress | plasma membrane | 92.86 | 90.7 |
| KRH62014 | Soybean | endoplasmic reticulum | 83.63 | 82.4 |
| KRH52673 | Soybean | plasma membrane | 83.63 | 82.4 |
| CDY03016 | Canola | extracellular, golgi, plasma membrane | 31.85 | 81.68 |
| KRH16232 | Soybean | plasma membrane | 80.95 | 79.77 |
| VIT_06s0009g03520.t01 | Wine grape | plasma membrane | 80.36 | 79.18 |
| PGSC0003DMT400024446 | Potato | plasma membrane | 79.17 | 79.17 |
| Solyc01g008820.2.1 | Tomato | plasma membrane | 79.46 | 78.99 |
| PGSC0003DMT400058489 | Potato | plasma membrane | 79.46 | 78.99 |
| Os05t0436400-03 | Rice | plasma membrane | 66.96 | 78.67 |
| Solyc11g064790.1.1 | Tomato | plasma membrane | 79.17 | 78.47 |
| Os02t0117400-01 | Rice | plasma membrane | 80.06 | 78.43 |
| TraesCS6B01G064500.2 | Wheat | plasma membrane | 78.57 | 77.42 |
| EES04366 | Sorghum | golgi, plasma membrane | 79.17 | 77.33 |
| TraesCS6B01G064600.2 | Wheat | plasma membrane | 77.98 | 76.83 |
| Zm00001d015006_P004 | Maize | plasma membrane | 79.17 | 76.66 |
| TraesCS3B01G545500.1 | Wheat | plasma membrane | 78.27 | 76.45 |
| HORVU6Hr1G009670.1 | Barley | plasma membrane | 77.68 | 76.32 |
| TraesCS3D01G492200.1 | Wheat | plasma membrane | 77.98 | 76.16 |
| TraesCSU01G107100.2 | Wheat | plasma membrane | 77.38 | 76.02 |
| TraesCS6A01G048100.2 | Wheat | plasma membrane | 76.79 | 75.44 |
| KXG37644 | Sorghum | plasma membrane | 77.98 | 74.22 |
| HORVU3Hr1G108010.6 | Barley | plasma membrane | 75.89 | 73.7 |
| GSMUA_Achr4P16430_001 | Banana | extracellular, plasma membrane, vacuole | 26.79 | 64.29 |
| Zm00001d015005_P002 | Maize | plasma membrane | 41.67 | 58.82 |
| Zm00001d054017_P003 | Maize | plasma membrane | 79.76 | 49.36 |
| OQU87114 | Sorghum | plasma membrane | 39.58 | 36.94 |
| CDY71437 | Canola | plasma membrane | 29.17 | 26.56 |
| CDY46118 | Canola | endoplasmic reticulum, plasma membrane | 29.17 | 26.56 |
| CDX72401 | Canola | endoplasmic reticulum, plasma membrane | 29.17 | 26.56 |
| CDX75349 | Canola | plasma membrane | 27.98 | 25.27 |
| CDX68973 | Canola | endoplasmic reticulum, plasma membrane | 27.68 | 25.0 |
| CDX67547 | Canola | plasma membrane | 12.8 | 24.57 |
| CDY53660 | Canola | plasma membrane | 19.05 | 23.19 |
| CDY38021 | Canola | plasma membrane | 25.89 | 16.11 |
| CDY30380 | Canola | plasma membrane, plastid | 22.92 | 16.04 |
| CDY15163 | Canola | plasma membrane | 25.6 | 15.93 |
| CDX90049 | Canola | plasma membrane | 25.6 | 15.93 |
| CDY53658 | Canola | plasma membrane | 25.6 | 15.9 |
| CDY08318 | Canola | plasma membrane | 24.7 | 15.4 |
| CDY45351 | Canola | plasma membrane | 24.4 | 15.21 |
| CDY63797 | Canola | plasma membrane | 23.21 | 14.42 |
| CDX86551 | Canola | plasma membrane | 22.92 | 14.23 |
| CDY29483 | Canola | cytosol | 6.85 | 14.2 |
| CDY56345 | Canola | plasma membrane | 17.56 | 13.2 |
| CDY55505 | Canola | plasma membrane | 25.3 | 10.75 |
Protein Annotations
| MapMan:18.10.1.4 | GO:A0A078FWA1 | UniProt:A0A078FWA1 | MEROPS:A22.A15 | EnsemblPlants:CDY17419 | ProteinID:CDY17419 |
| ProteinID:CDY17419.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005575 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00095547001 | PFAM:PF04258 | PFscan:PS51257 | PANTHER:PTHR12174 | PANTHER:PTHR12174:SF23 | InterPro:Peptidase_A22B_SPP |
| InterPro:Preselin/SPP | SMART:SM00730 | TMHMM:TMhelix | UniParc:UPI0004EBFC9E | SEG:seg | : |
Description
BnaC09g21180DBnaC09g21180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWA1]
Coordinates
chrLK032073:-:89239..91942
Molecular Weight (calculated)
37295.3 Da
IEP (calculated)
8.956
GRAVY (calculated)
0.645
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNCERIANL ALAGLTVAPL VVRVNPNLNV VLTACLTVYV GCFRSVKDSP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI SRFLPKPWND NLIVWRFPYF KSLEVEFKKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LVGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSKRSQ PKYFTSAFVG YVVGVVLTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCVWN GDIKPLLAFD ESSKSTEEEV SKTHEE
101: ALSATLLPAI SRFLPKPWND NLIVWRFPYF KSLEVEFKKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LVGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSKRSQ PKYFTSAFVG YVVGVVLTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCVWN GDIKPLLAFD ESSKSTEEEV SKTHEE
001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
Arabidopsis Description
SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.