CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g098200.2.1	Tomato	plasma membrane	53.26	55.47
PGSC0003DMT400031075	Potato	cytosol, peroxisome, plasma membrane	53.26	48.84
CDY53658	Canola	plasma membrane	89.49	45.66
TraesCS7D01G002900.1	Wheat	plasma membrane	52.54	42.52
CDY30380	Canola	plasma membrane, plastid	70.29	40.42
GSMUA_Achr8P16510_001	Banana	plasma membrane	57.61	40.36
AT2G43070.4	Thale cress	plasma membrane	85.51	39.01
TraesCS4A01G495400.1	Wheat	peroxisome, plasma membrane, vacuole	46.38	37.1
Os11t0433200-02	Rice	cytosol, plasma membrane	57.61	34.95
KRH46863	Soybean	endoplasmic reticulum	62.32	32.45
KRH01823	Soybean	plasma membrane	61.59	32.08
CDY56345	Canola	plasma membrane	51.45	31.77
CDY55505	Canola	plasma membrane	89.86	31.35
KRG93116	Soybean	plasma membrane	58.33	31.32
VIT_05s0062g01250.t01	Wine grape	plasma membrane	59.42	30.77
Solyc12g098670.1.1	Tomato	plasma membrane	58.33	30.26
KRH36351	Soybean	plasma membrane	56.88	30.19
TraesCS7D01G003100.1	Wheat	plasma membrane	58.33	30.09
PGSC0003DMT400011660	Potato	plasma membrane	57.97	30.08
TraesCS7A01G003000.1	Wheat	plasma membrane	57.97	29.91
CDX86551	Canola	plasma membrane	57.97	29.57
CDY63797	Canola	plasma membrane	57.97	29.57
TraesCS4A01G495600.2	Wheat	plasma membrane	57.25	29.31
OQU81829	Sorghum	plasma membrane	55.43	28.65
TraesCS7A01G003200.1	Wheat	plasma membrane	48.91	27.95
CDY03016	Canola	extracellular, golgi, plasma membrane	13.04	27.48
CDX67547	Canola	plasma membrane	17.39	27.43
GSMUA_Achr11P...	Banana	plasma membrane	39.86	26.7
HORVU7Hr1G000380.6	Barley	plasma membrane	50.72	26.17
CDY45351	Canola	plasma membrane	49.28	25.23
CDY08318	Canola	plasma membrane	49.28	25.23
CDX90049	Canola	plasma membrane	49.28	25.19
CDY15163	Canola	plasma membrane	49.28	25.19
CDY38021	Canola	plasma membrane	48.91	25.0
CDX72401	Canola	endoplasmic reticulum, plasma membrane	26.45	19.78
CDY71437	Canola	plasma membrane	26.09	19.51
CDY46118	Canola	endoplasmic reticulum, plasma membrane	26.09	19.51
CDX75349	Canola	plasma membrane	25.72	19.09
CDY17419	Canola	plasma membrane	23.19	19.05
CDY60831	Canola	plasma membrane	23.19	19.05
CDX68973	Canola	endoplasmic reticulum, plasma membrane	25.36	18.82
CDY45179	Canola	plasma membrane	22.46	18.51
CDY03017	Canola	plasma membrane	22.46	18.51
CDY09342	Canola	plasma membrane	22.46	18.08
CDY64408	Canola	plasma membrane	22.46	18.08
Zm00001d004702_P006	Maize	plasma membrane	48.91	17.67
CDX88296	Canola	plasma membrane	18.84	17.57
GSMUA_AchrUn_...	Banana	plasma membrane	24.64	16.31
CDY29483	Canola	cytosol	5.07	8.64

Protein Annotations

MapMan:18.10.1.4	GO:A0A078IRH9	UniProt:A0A078IRH9	MEROPS:A22.A06	EnsemblPlants:CDY53660	ProteinID:CDY53660
ProteinID:CDY53660.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00011144001	PFAM:PF04258	PANTHER:PTHR12174	PANTHER:PTHR12174:SF44	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP
SMART:SM00730	TMHMM:TMhelix	UniParc:UPI0004EE02D6	SEG:seg	:	:

Description

BnaC04g52940DBnaC04g52940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRH9]

Coordinates

chrLK033224:-:60008..62409

Molecular Weight (calculated)

31081.6 Da

IEP (calculated)

8.451

GRAVY (calculated)

0.439

Length

276 amino acids

Sequence
(BLAST)

001: MQDDYAILSP PHDRALTPVT QPPLKAIHSS SKRLRKWIKP EWRHLGRRSV KLPLLGTMSW MSLLVNIFCL AFAVFWFVKR HTSYAWAGQD ILGICLMITA
101: LQVVRLPNIK VATVLLCCAF VYDIFWVFIS PLIFHESVMI VVAQGDSSSG ESIPMLLRIP RFFDPWGGYD MIGFGDILFP GLLISFASRY DKIKKRVISS
201: GYFLWLTIGY GVGLLLTYLG LYLMDGHGQP ALLYIVPCTL GLAVILGLVR GELKELWNYG IEESESNTPE DPLPVA

Best Arabidopsis Sequence Match ( AT1G05820.4 )
(BLAST)

001: MVCGEKDTSL NVSIPILMIT TSSGDALKKS IMQNKKVELL LYAPKSPIVD YAVVFLWLMS VGTVFVASVW SHVTSPKKND EQYDELSPKK SSNVDATKGG
101: AEEETLDISA MGAVIFVISA STFLVLLFFF MSSWFILILT IFFVIGGMQG MHNINVTLIT RRCSKCGQKN LKLPLLGNTS ILSLVVLLFC FVVAILWFMN
201: RKTSHAWAGQ DIFGICMMIN VLQVARLPNI RVATILLCCA FFYDIFWVFI SPLIFKQSVM IAVARGSKDT GESIPMLLRI PRLSDPWGGY NMIGFGDILF
301: PGLLICFIFR FDKENNKGVS NGYFPWLMFG YGLGLFLTYL GLYVMNGHGQ PALLYLVPCT LGITVILGLV RKELRDLWNY GTQQPSAADV NPSPEA

Arabidopsis Description

SPPL5Signal peptide peptidase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA44]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.