Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025596.1-P | Field mustard | plasma membrane | 90.29 | 68.7 |
| CDY29483 | Canola | cytosol | 45.71 | 49.38 |
| CDX68973 | Canola | endoplasmic reticulum, plasma membrane | 82.29 | 38.71 |
| CDX75349 | Canola | plasma membrane | 82.29 | 38.71 |
| CDX72401 | Canola | endoplasmic reticulum, plasma membrane | 79.43 | 37.67 |
| CDY71437 | Canola | plasma membrane | 79.43 | 37.67 |
| CDY46118 | Canola | endoplasmic reticulum, plasma membrane | 79.43 | 37.67 |
| AT4G33410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 78.86 | 37.1 |
| VIT_16s0050g00580.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 72.57 | 34.23 |
| KRH35289 | Soybean | endoplasmic reticulum, plasma membrane | 72.57 | 34.14 |
| KRG91538 | Soybean | endoplasmic reticulum, plasma membrane | 72.57 | 34.14 |
| PGSC0003DMT400040816 | Potato | plasma membrane | 69.14 | 33.99 |
| Solyc03g025550.2.1 | Tomato | plasma membrane | 69.71 | 32.36 |
| Zm00001d049930_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 68.57 | 32.34 |
| Zm00001d031933_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 68.57 | 32.26 |
| KXG25380 | Sorghum | plasma membrane | 68.0 | 32.08 |
| Os10t0393100-01 | Rice | plasma membrane | 67.43 | 31.81 |
| GSMUA_Achr3P14450_001 | Banana | endoplasmic reticulum, plasma membrane | 66.29 | 31.18 |
| TraesCS7D01G279200.2 | Wheat | plasma membrane | 65.71 | 30.91 |
| TraesCS7B01G181000.2 | Wheat | plasma membrane | 65.71 | 30.91 |
| TraesCS7A01G280600.1 | Wheat | plasma membrane | 65.71 | 30.91 |
| HORVU7Hr1G059420.1 | Barley | plasma membrane | 65.71 | 30.91 |
| CDY53660 | Canola | plasma membrane | 27.43 | 17.39 |
| CDX88296 | Canola | plasma membrane | 24.57 | 14.53 |
| CDY03017 | Canola | plasma membrane | 24.57 | 12.84 |
| CDY45179 | Canola | plasma membrane | 24.57 | 12.84 |
| CDY17419 | Canola | plasma membrane | 24.57 | 12.8 |
| CDY60831 | Canola | plasma membrane | 24.57 | 12.8 |
| CDY09342 | Canola | plasma membrane | 24.57 | 12.54 |
| CDY64408 | Canola | plasma membrane | 24.57 | 12.54 |
| CDY03016 | Canola | extracellular, golgi, plasma membrane | 9.14 | 12.21 |
| CDY30380 | Canola | plasma membrane, plastid | 25.71 | 9.38 |
| CDY53658 | Canola | plasma membrane | 27.43 | 8.87 |
| CDY63797 | Canola | plasma membrane | 24.57 | 7.95 |
| CDX86551 | Canola | plasma membrane | 24.57 | 7.95 |
| CDY45351 | Canola | plasma membrane | 24.0 | 7.79 |
| CDX90049 | Canola | plasma membrane | 24.0 | 7.78 |
| CDY15163 | Canola | plasma membrane | 24.0 | 7.78 |
| CDY38021 | Canola | plasma membrane | 24.0 | 7.78 |
| CDY08318 | Canola | plasma membrane | 23.43 | 7.61 |
| CDY55505 | Canola | plasma membrane | 27.43 | 6.07 |
| CDY56345 | Canola | plasma membrane | 6.86 | 2.68 |
Protein Annotations
| EnsemblPlants:CDX67547 | EnsemblPlantsGene:GSBRNA2T00098680001 | GO:A0A078BTP4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | InterPro:Peptidase_A22B_SPP | PANTHER:PTHR12174 |
| PANTHER:PTHR12174:SF22 | PFAM:PF04258 | ProteinID:CDX67547 | ProteinID:CDX67547.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EED70E | MapMan:18.10.1.4 | : | : | : | : |
Description
BnaA07g15870D
Coordinates
chrLK031787:-:886712..887450
Molecular Weight (calculated)
19322.5 Da
IEP (calculated)
8.494
GRAVY (calculated)
0.766
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGLLLVACA VTVVAWLVSG HWVLNNLLGI SICIAFVSHV RLPNIKICTM LLLCLFVYDI FWVFFSERFF GANVMVTVAT QQALNPVHTV ANSLNLPGLE
101: LITKKLELPV KIMFPRNLLG GVEPGVSASE FMMLGLGDMV ALYVGGLYIC GKIGWESVMK MGQDTRELSR MKRTV
101: LITKKLELPV KIMFPRNLLG GVEPGVSASE FMMLGLGDMV ALYVGGLYIC GKIGWESVMK MGQDTRELSR MKRTV
001: METLWTLLYL LEPAPATLIV TAVTVTFASA FRALNYGKEM ERNRDFSEAS ITLDSSQALM IPVMSSCSLL LMFYLFSSVS QLLTAFTAIA SVSSLFYWLS
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
Arabidopsis Description
SPPL1Signal peptide peptidase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z32]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.