Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036397.1-P | Field mustard | plasma membrane | 41.36 | 45.89 |
| CDX67547 | Canola | plasma membrane | 49.38 | 45.71 |
| CDY71437 | Canola | plasma membrane | 53.7 | 23.58 |
| CDY46118 | Canola | endoplasmic reticulum, plasma membrane | 53.7 | 23.58 |
| CDX72401 | Canola | endoplasmic reticulum, plasma membrane | 53.09 | 23.31 |
| CDX68973 | Canola | endoplasmic reticulum, plasma membrane | 52.47 | 22.85 |
| CDX75349 | Canola | plasma membrane | 52.47 | 22.85 |
| AT4G33410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 50.62 | 22.04 |
| KRH35289 | Soybean | endoplasmic reticulum, plasma membrane | 49.38 | 21.51 |
| KRG91538 | Soybean | endoplasmic reticulum, plasma membrane | 49.38 | 21.51 |
| VIT_16s0050g00580.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 47.53 | 20.75 |
| PGSC0003DMT400040816 | Potato | plasma membrane | 43.83 | 19.94 |
| GSMUA_Achr3P14450_001 | Banana | endoplasmic reticulum, plasma membrane | 45.68 | 19.89 |
| Zm00001d049930_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 44.44 | 19.41 |
| Os10t0393100-01 | Rice | plasma membrane | 44.44 | 19.41 |
| KXG25380 | Sorghum | plasma membrane | 44.44 | 19.41 |
| Solyc03g025550.2.1 | Tomato | plasma membrane | 45.06 | 19.36 |
| Zm00001d031933_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 44.44 | 19.35 |
| TraesCS7D01G279200.2 | Wheat | plasma membrane | 44.44 | 19.35 |
| TraesCS7B01G181000.2 | Wheat | plasma membrane | 44.44 | 19.35 |
| TraesCS7A01G280600.1 | Wheat | plasma membrane | 44.44 | 19.35 |
| HORVU7Hr1G059420.1 | Barley | plasma membrane | 44.44 | 19.35 |
| CDX88296 | Canola | plasma membrane | 14.2 | 7.77 |
| CDY03016 | Canola | extracellular, golgi, plasma membrane | 6.17 | 7.63 |
| CDY45179 | Canola | plasma membrane | 14.2 | 6.87 |
| CDY03017 | Canola | plasma membrane | 14.2 | 6.87 |
| CDY17419 | Canola | plasma membrane | 14.2 | 6.85 |
| CDY60831 | Canola | plasma membrane | 14.2 | 6.85 |
| CDY64408 | Canola | plasma membrane | 14.2 | 6.71 |
| CDY09342 | Canola | plasma membrane | 14.2 | 6.71 |
| CDY53660 | Canola | plasma membrane | 8.64 | 5.07 |
| CDY63797 | Canola | plasma membrane | 11.73 | 3.51 |
| CDX86551 | Canola | plasma membrane | 11.73 | 3.51 |
| CDY53658 | Canola | plasma membrane | 10.49 | 3.14 |
| CDY08318 | Canola | plasma membrane | 9.88 | 2.97 |
| CDY45351 | Canola | plasma membrane | 9.88 | 2.97 |
| CDY56345 | Canola | plasma membrane | 8.02 | 2.91 |
| CDY15163 | Canola | plasma membrane | 8.64 | 2.59 |
| CDX90049 | Canola | plasma membrane | 8.64 | 2.59 |
| CDY38021 | Canola | plasma membrane | 8.64 | 2.59 |
| CDY30380 | Canola | plasma membrane, plastid | 6.79 | 2.29 |
| CDY55505 | Canola | plasma membrane | 10.49 | 2.15 |
Protein Annotations
| MapMan:35.1 | GO:A0A078GY12 | UniProt:A0A078GY12 | EnsemblPlants:CDY29483 | ProteinID:CDY29483 | ProteinID:CDY29483.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00043155001 |
| PFAM:PF04258 | PANTHER:PTHR12174 | PANTHER:PTHR12174:SF22 | InterPro:Peptidase_A22B_SPP | UniParc:UPI0004EF21D9 | SEG:seg |
Description
BnaA06g14870DBnaA06g14870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY12]
Coordinates
chrLK032238:+:122264..124113
Molecular Weight (calculated)
17481.2 Da
IEP (calculated)
6.517
GRAVY (calculated)
0.054
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTFDLIQAD LATAETREVC SSSDDSSSSS PIKLSTIHRY QATTSTGMES TGMSPLSTGR FFGTNVMVTV ATQQASNPVH TVANSLNLPG LELITKKLEL
101: PVKIVFRGVE PGVSASEFMM LGLGDMVALY VGGLYICGKI GWESVMKMGQ DTRELSRMKR TV
101: PVKIVFRGVE PGVSASEFMM LGLGDMVALY VGGLYICGKI GWESVMKMGQ DTRELSRMKR TV
001: METLWTLLYL LEPAPATLIV TAVTVTFASA FRALNYGKEM ERNRDFSEAS ITLDSSQALM IPVMSSCSLL LMFYLFSSVS QLLTAFTAIA SVSSLFYWLS
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
Arabidopsis Description
SPPL1Signal peptide peptidase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z32]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.