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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 8
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030626.1-P Field mustard plasma membrane 98.52 98.52
CDY63797 Canola plasma membrane 98.15 98.15
AT1G05820.1 Thale cress plasma membrane 83.92 84.7
PGSC0003DMT400031075 Potato cytosol, peroxisome, plasma membrane 34.75 62.46
VIT_05s0062g01250.t01 Wine grape plasma membrane 60.07 60.98
Solyc09g098200.2.1 Tomato plasma membrane 29.76 60.75
KRH46863 Soybean endoplasmic reticulum 58.23 59.43
CDY53658 Canola plasma membrane 59.15 59.15
KRH01823 Soybean plasma membrane 57.86 59.06
KRH36351 Soybean plasma membrane 56.75 59.04
KRG93116 Soybean plasma membrane 56.01 58.95
GSMUA_Achr8P16510_001 Banana plasma membrane 42.88 58.88
CDY53660 Canola plasma membrane 29.57 57.97
Os11t0433200-02 Rice cytosol, plasma membrane 46.58 55.38
Solyc12g098670.1.1 Tomato plasma membrane 53.6 54.51
PGSC0003DMT400011660 Potato plasma membrane 53.42 54.32
TraesCS7A01G003000.1 Wheat plasma membrane 53.6 54.21
OQU81829 Sorghum plasma membrane 53.23 53.93
TraesCS7D01G003100.1 Wheat plasma membrane 52.87 53.46
TraesCS4A01G495600.2 Wheat plasma membrane 52.68 52.88
CDY30380 Canola plasma membrane, plastid 46.4 52.29
TraesCS7D01G002900.1 Wheat plasma membrane 32.72 51.91
HORVU7Hr1G000380.6 Barley plasma membrane 50.09 50.65
GSMUA_Achr11P... Banana plasma membrane 38.45 50.49
TraesCS4A01G495400.1 Wheat peroxisome, plasma membrane, vacuole 30.87 48.41
GSMUA_AchrUn_... Banana plasma membrane 36.23 47.0
CDY56345 Canola plasma membrane 38.63 46.76
TraesCS7A01G003200.1 Wheat plasma membrane 39.74 44.51
CDY15163 Canola plasma membrane 43.07 43.15
CDX90049 Canola plasma membrane 43.07 43.15
CDY38021 Canola plasma membrane 43.07 43.15
CDY45351 Canola plasma membrane 42.14 42.3
CDY08318 Canola plasma membrane 41.77 41.93
CDY55505 Canola plasma membrane 58.41 39.95
Zm00001d004702_P006 Maize plasma membrane 48.8 34.55
CDY03016 Canola extracellular, golgi, plasma membrane 6.28 25.95
CDX67547 Canola plasma membrane 7.95 24.57
CDX68973 Canola endoplasmic reticulum, plasma membrane 16.08 23.39
CDX88296 Canola plasma membrane 12.75 23.31
CDX72401 Canola endoplasmic reticulum, plasma membrane 15.9 23.31
CDY60831 Canola plasma membrane 14.42 23.21
CDY71437 Canola plasma membrane 15.71 23.04
CDY46118 Canola endoplasmic reticulum, plasma membrane 15.71 23.04
CDY45179 Canola plasma membrane 14.23 22.99
CDY03017 Canola plasma membrane 14.23 22.99
CDY17419 Canola plasma membrane 14.23 22.92
CDX75349 Canola plasma membrane 15.71 22.85
CDY64408 Canola plasma membrane 14.23 22.45
CDY09342 Canola plasma membrane 14.23 22.45
CDY29483 Canola cytosol 3.51 11.73
Protein Annotations
MapMan:18.10.1.4Gene3D:3.50.30.30GO:A0A078DBB4MEROPS:A22.A04EnsemblPlants:CDX86551ProteinID:CDX86551
ProteinID:CDX86551.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00145168001InterPro:PA_domainPFAM:PF02225PFAM:PF04258
PANTHER:PTHR12174PANTHER:PTHR12174:SF44InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPPSMART:SM00730SUPFAM:SSF52025
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDDF51SEG:seg::
Description
BnaC08g01520D
Coordinates
chrLK031846:-:543922..546676
Molecular Weight (calculated)
58955.5 Da
IEP (calculated)
6.279
GRAVY (calculated)
0.455
Length
541 amino acids
Sequence
(BLAST)
001: MSLPPFSCRI LAAAVALYLT GLLCLGAGEA PSKDAAAPKI PGCSNEYQMV KVENWVNGEN GEDFSGMTAQ FGAVLPSDKD KAVRLPVVLT TPLNSCSNLT
101: SKLSGSIALS VRGECTFTAK AQVAQAGGAA ALVLINDKEE LDEMACTEGE SPLTLTIPVL MITTSSGDAL KKSLVANKKV ELLLYAPKSP VVDYAVAFLW
201: LMSVGTVFIA SVWSHCTGPK ENDEEYNELS PKKSSVDGAT KDATKDDDET LDISATGAVI FVISASTFLV LLFFFMSSWF ILILTVFFCI GGMQGMHNII
301: YTLITMRCNK CGRKTVKVPL FGNVTILSLM VLLFCFVVAV VWFINRKTSY AWAGQDIFGI CLMINVLQVA RLPNIRVATI LLCCAFCYDI FWVFLSPLIF
401: KQSVMIAVAR GSKDTGESIP MLLRFPRLSD PWGGYNMIGF GDILFPGLLI CFIFRYDREN NKGVVKGYFP WLMFGYGLGL FLTYLGLYLM NGHGQPALLY
501: LVPCTLGITV ILGLVRKELR DLWNYGTQEP SVSDVNPSPG A
Best Arabidopsis Sequence Match ( AT1G05820.1 )
(BLAST)
001: MSLPPFTCRL LAAAAALYLI GLLCVGADTK DVTAPKIPGC SNEFQMVKVE NWVNGENGET FTAMTAQFGT MLPSDKDKAV KLPVALTTPL DSCSNLTSKL
101: SWSIALSVRG ECAFTVKAQV AQAGGAAALV LINDKEELDE MVCGEKDTSL NVSIPILMIT TSSGDALKKS IMQNKKVELL LYAPKSPIVD YAVVFLWLMS
201: VGTVFVASVW SHVTSPKKND EQYDELSPKK SSNVDATKGG AEEETLDISA MGAVIFVISA STFLVLLFFF MSSWFILILT IFFVIGGMQG MHNINVTLIT
301: RRCSKCGQKN LKLPLLGNTS ILSLVVLLFC FVVAILWFMN RKTSHAWAGQ DIFGICMMIN VLQVARLPNI RVATILLCCA FFYDIFWVFI SPLIFKQSVM
401: IAVARGSKDT GESIPMLLRI PRLSDPWGGY NMIGFGDILF PGLLICFIFR FDKENNKGVS NGYFPWLMFG YGLGLFLTYL GLYVMNGHGQ PALLYLVPCT
501: LGITVILGLV RKELRDLWNY GTQQPSAADV NPSPEA
Arabidopsis Description
SPPL5Signal peptide peptidase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA44]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.