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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004741.1-P Field mustard plasma membrane 68.27 99.82
CDY53658 Canola plasma membrane 67.26 98.34
CDY53660 Canola plasma membrane 31.35 89.86
AT2G43070.4 Thale cress plasma membrane 62.07 81.16
CDY30380 Canola plasma membrane, plastid 46.78 77.08
CDY56345 Canola plasma membrane 40.08 70.92
Solyc09g098200.2.1 Tomato plasma membrane 20.48 61.13
GSMUA_Achr8P16510_001 Banana plasma membrane 30.34 60.91
VIT_05s0062g01250.t01 Wine grape plasma membrane 40.71 60.41
KRH46863 Soybean endoplasmic reticulum 39.7 59.25
KRH01823 Soybean plasma membrane 39.44 58.87
PGSC0003DMT400031075 Potato cytosol, peroxisome, plasma membrane 22.25 58.47
CDX86551 Canola plasma membrane 39.95 58.41
KRG93116 Soybean plasma membrane 37.8 58.17
CDY63797 Canola plasma membrane 39.7 58.04
Os11t0433200-02 Rice cytosol, plasma membrane 33.0 57.36
KRH36351 Soybean plasma membrane 37.42 56.92
OQU81829 Sorghum plasma membrane 38.05 56.37
TraesCS7D01G002900.1 Wheat plasma membrane 24.27 56.3
TraesCS7D01G003100.1 Wheat plasma membrane 37.29 55.14
TraesCS7A01G003000.1 Wheat plasma membrane 37.29 55.14
TraesCS4A01G495600.2 Wheat plasma membrane 36.79 53.99
TraesCS4A01G495400.1 Wheat peroxisome, plasma membrane, vacuole 23.01 52.75
Solyc12g098670.1.1 Tomato plasma membrane 35.27 52.44
PGSC0003DMT400011660 Potato plasma membrane 35.15 52.26
HORVU7Hr1G000380.6 Barley plasma membrane 34.89 51.59
GSMUA_Achr11P... Banana plasma membrane 25.66 49.27
TraesCS7A01G003200.1 Wheat plasma membrane 28.95 47.41
GSMUA_AchrUn_... Banana plasma membrane 24.53 46.52
CDY38021 Canola plasma membrane 31.1 45.56
CDY15163 Canola plasma membrane 30.72 45.0
CDX90049 Canola plasma membrane 30.72 45.0
CDY45351 Canola plasma membrane 30.47 44.71
CDY08318 Canola plasma membrane 30.21 44.34
Zm00001d004702_P006 Maize plasma membrane 35.27 36.52
CDY03016 Canola extracellular, golgi, plasma membrane 4.68 28.24
CDX67547 Canola plasma membrane 6.07 27.43
CDX72401 Canola endoplasmic reticulum, plasma membrane 11.88 25.47
CDY60831 Canola plasma membrane 10.75 25.3
CDY17419 Canola plasma membrane 10.75 25.3
CDX75349 Canola plasma membrane 11.88 25.27
CDY71437 Canola plasma membrane 11.76 25.2
CDY46118 Canola endoplasmic reticulum, plasma membrane 11.76 25.2
CDY03017 Canola plasma membrane 10.49 24.78
CDY45179 Canola plasma membrane 10.49 24.78
CDX88296 Canola plasma membrane 9.23 24.66
CDX68973 Canola endoplasmic reticulum, plasma membrane 11.5 24.46
CDY64408 Canola plasma membrane 10.49 24.2
CDY09342 Canola plasma membrane 10.49 24.2
CDY29483 Canola cytosol 2.15 10.49
Protein Annotations
MapMan:18.10.1.4Gene3D:3.50.30.30GO:A0A078IVI4UniProt:A0A078IVI4MEROPS:A22.A06EnsemblPlants:CDY55505
ProteinID:CDY55505ProteinID:CDY55505.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00016980001InterPro:PA_domainPFAM:PF02225PFAM:PF04258PANTHER:PTHR12174
PANTHER:PTHR12174:SF44InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPPSMART:SM00730SUPFAM:SSF52025SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EF2E2CSEG:seg:::
Description
BnaA05g34420DBnaA05g34420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVI4]
Coordinates
chrLK033410:-:34622..39454
Molecular Weight (calculated)
87487.6 Da
IEP (calculated)
6.945
GRAVY (calculated)
0.491
Length
791 amino acids
Sequence
(BLAST)
001: MPSSDPPRHR CSTALLFLLL LGFSFAAADD ASWTEDSTLE SPGCTNKFQM VKILNWVDGV ESNDFLTGLT AQFGESLPSD AGQGVRSPVA FVRPLDSCSN
101: LSSRLDGSIA LSIRGNCAFT EKAKHAEAAG ASALLVINDK EDLDEMGCME KDTSLNVSIP VLMISKSSGD ALNKSMVDNK SVELLLYAPS RPAVDLTAGL
201: LLLMAVGTVV VASLWSDLTD PDQANESYSI LAKEFSGAGT RKDDPEKEIL DISVTGAVFF IVTASIFLLL LFYFMSSWFV WVLTIFFCIG GMQGMHNIIT
301: AVLLRKWRHL GRRSVKLPLL GTMSWMSLLV NIFCLAFAVF WFVKRHTSYA WAGQDTLGIC LMITALQVVR LPNIKVATVL LCCAFVYDIF WVFISPLIFH
401: ESVMIVVAQG DSSSGESIPM LLRIPRFFDP WGGYDMIGFG DILFPGLLIS FASRYDKIKK RVISSGYFLW LTIGYGVGLL LTYLGLYLMD GHGQPALLYI
501: VPCTLGNNTR SSSFSSSYLI LSMGLKQKLD VFFSFSRFGC HSRGMHNIIT AVLLRKWRHL GRRSVKLPLL GTMSWMSLLV NIFCLAFAVF WFVKRHTSYA
601: WAGQDTLGIC LMITALQVVR LPNIKVATVL LCCAFVYDIF WVFISPLIFH ESVMIVVAQG DSSSGESIPM LLRIPRFFDP WGGYDMIGFG DILFPGLLIS
701: FASRYDKIKK RVISSGYFLW LTIGYGVGLL LTYLGLYLMD GHGQPALLYI VPCTLGLAVI LGLVRGELKE LWNYGIEESE SNTPEDTLPV A
Best Arabidopsis Sequence Match ( AT2G43070.3 )
(BLAST)
001: MNHSKIGTIE TVKELLNLED KKDYNIDRPI YPRKILTATL CLFFFFFFFF SPICSVDCVM SSFDPPNHRY SALVLILLLL GFSVAAADDV SWTEDSSLES
101: PGCTNKFQMV KVLNWVDGVE GDFLTGLTAQ FGAALPSVPD QALRFPAAFV DPLDSCSHLS SRLDGHIALS IRGNCAFTEK AKHAEAAGAS ALLVINDKED
201: LDEMGCMEKD TSLNVSIPVL MISKSSGDAL NKSMVDNKNV ELLLYAPKRP AVDLTAGLLL LMAVGTVVVA SLWSELTDPD QANESYSILA KDVSSAGTRK
301: DDPEKEILDI SVTGAVFFIV TASIFLLLLF YFMSSWFVWV LTIFFCIGGM QGMHNIIMAV ILRKCRHLAR KSVKLPLLGT MSVLSLLVNI VCLAFAVFWF
401: IKRHTSYSWV GQDILGICLM ITALQVVRLP NIKVATVLLC CAFVYDIFWV FISPLIFHES VMIVVAQGDS STGESIPMLL RIPRFFDPWG GYDMIGFGDI
501: LFPGLLISFA SRYDKIKKRV ISNGYFLWLT IGYGIGLLLT YLGLYLMDGH GQPALLYIVP CTLGLAVILG LVRGELKELW NYGIEESESH TPEDPMPVA
Arabidopsis Description
SPPL3SIGNAL PEPTIDE PEPTIDASE-LIKE 3 [Source:TAIR;Acc:AT2G43070]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.