Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 8
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03017 | Canola | plasma membrane | 99.7 | 99.7 |
| CDY60831 | Canola | plasma membrane | 96.42 | 96.13 |
| CDX88296 | Canola | plasma membrane | 84.78 | 95.95 |
| CDY64408 | Canola | plasma membrane | 98.21 | 95.92 |
| CDY17419 | Canola | plasma membrane | 96.12 | 95.83 |
| Bra026567.1-P | Field mustard | plasma membrane | 97.91 | 95.63 |
| CDY09342 | Canola | plasma membrane | 97.31 | 95.04 |
| AT2G03120.1 | Thale cress | plasma membrane | 94.03 | 91.57 |
| CDY03016 | Canola | extracellular, golgi, plasma membrane | 34.63 | 88.55 |
| KRH52673 | Soybean | plasma membrane | 83.88 | 82.4 |
| KRH62014 | Soybean | endoplasmic reticulum | 83.88 | 82.4 |
| PGSC0003DMT400024446 | Potato | plasma membrane | 80.3 | 80.06 |
| KRH16232 | Soybean | plasma membrane | 81.49 | 80.06 |
| VIT_06s0009g03520.t01 | Wine grape | plasma membrane | 81.49 | 80.06 |
| Solyc01g008820.2.1 | Tomato | plasma membrane | 80.3 | 79.59 |
| PGSC0003DMT400058489 | Potato | plasma membrane | 80.3 | 79.59 |
| Solyc11g064790.1.1 | Tomato | plasma membrane | 80.3 | 79.35 |
| Os05t0436400-03 | Rice | plasma membrane | 67.16 | 78.67 |
| Os02t0117400-01 | Rice | plasma membrane | 80.3 | 78.43 |
| TraesCS6B01G064500.2 | Wheat | plasma membrane | 79.4 | 78.01 |
| Zm00001d015006_P004 | Maize | plasma membrane | 80.3 | 77.52 |
| TraesCS6B01G064600.2 | Wheat | plasma membrane | 78.81 | 77.42 |
| EES04366 | Sorghum | golgi, plasma membrane | 79.4 | 77.33 |
| HORVU6Hr1G009670.1 | Barley | plasma membrane | 78.51 | 76.9 |
| TraesCS3B01G545500.1 | Wheat | plasma membrane | 78.81 | 76.74 |
| TraesCS3D01G492200.1 | Wheat | plasma membrane | 78.51 | 76.45 |
| TraesCSU01G107100.2 | Wheat | plasma membrane | 77.61 | 76.02 |
| TraesCS6A01G048100.2 | Wheat | plasma membrane | 77.61 | 76.02 |
| HORVU3Hr1G108010.6 | Barley | plasma membrane | 76.72 | 74.28 |
| KXG37644 | Sorghum | plasma membrane | 78.21 | 74.22 |
| GSMUA_Achr4P16430_001 | Banana | extracellular, plasma membrane, vacuole | 26.87 | 64.29 |
| Zm00001d015005_P002 | Maize | plasma membrane | 41.79 | 58.82 |
| Zm00001d054017_P003 | Maize | plasma membrane | 79.7 | 49.17 |
| OQU87114 | Sorghum | plasma membrane | 38.81 | 36.11 |
| CDY71437 | Canola | plasma membrane | 29.55 | 26.83 |
| CDY46118 | Canola | endoplasmic reticulum, plasma membrane | 29.55 | 26.83 |
| CDX72401 | Canola | endoplasmic reticulum, plasma membrane | 29.55 | 26.83 |
| CDX75349 | Canola | plasma membrane | 28.36 | 25.54 |
| CDX68973 | Canola | endoplasmic reticulum, plasma membrane | 28.06 | 25.27 |
| CDX67547 | Canola | plasma membrane | 12.84 | 24.57 |
| CDY53660 | Canola | plasma membrane | 18.51 | 22.46 |
| CDY38021 | Canola | plasma membrane | 25.37 | 15.74 |
| CDY30380 | Canola | plasma membrane, plastid | 22.39 | 15.62 |
| CDX90049 | Canola | plasma membrane | 25.07 | 15.56 |
| CDY15163 | Canola | plasma membrane | 25.07 | 15.56 |
| CDY53658 | Canola | plasma membrane | 25.07 | 15.53 |
| CDY08318 | Canola | plasma membrane | 24.18 | 15.03 |
| CDY45351 | Canola | plasma membrane | 23.88 | 14.84 |
| CDY63797 | Canola | plasma membrane | 23.28 | 14.42 |
| CDX86551 | Canola | plasma membrane | 22.99 | 14.23 |
| CDY29483 | Canola | cytosol | 6.87 | 14.2 |
| CDY56345 | Canola | plasma membrane | 17.01 | 12.75 |
| CDY55505 | Canola | plasma membrane | 24.78 | 10.49 |
Protein Annotations
| MapMan:18.10.1.4 | GO:A0A078I6Y8 | UniProt:A0A078I6Y8 | MEROPS:A22.A15 | EnsemblPlants:CDY45179 | ProteinID:CDY45179 |
| ProteinID:CDY45179.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005575 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00081602001 | PFAM:PF04258 | PFscan:PS51257 | PANTHER:PTHR12174 | PANTHER:PTHR12174:SF23 | InterPro:Peptidase_A22B_SPP |
| InterPro:Preselin/SPP | SMART:SM00730 | TMHMM:TMhelix | UniParc:UPI000253F864 | SEG:seg | : |
Description
BnaA06g33830DBnaA06g33830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6Y8]
Coordinates
chrLK032617:-:76885..79551
Molecular Weight (calculated)
37167.1 Da
IEP (calculated)
8.762
GRAVY (calculated)
0.655
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNCERIANL ALAGLTVAPL VVRVNPNLNV VLTACLTVYV GCFRSVKDSP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI SRFLPKPWND NLIVWRFPYF KSLEVEFTKS QVIAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LVGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRSK PQYFTSAFVG YVAGVVLTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLMAFD ESKTTEGEVD KAHEE
101: ALSATLLPAI SRFLPKPWND NLIVWRFPYF KSLEVEFTKS QVIAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LVGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRSK PQYFTSAFVG YVAGVVLTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLMAFD ESKTTEGEVD KAHEE
001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
Arabidopsis Description
SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.