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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G03120.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT2G03120.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT2G03120.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G064600.2 Wheat plasma membrane 97.95 97.95
HORVU6Hr1G009670.1 Barley plasma membrane 95.89 95.61
TraesCS6A01G048100.2 Wheat plasma membrane 95.89 95.61
TraesCSU01G107100.2 Wheat plasma membrane 95.89 95.61
TraesCS3B01G545500.1 Wheat plasma membrane 90.32 89.53
Os02t0117400-01 Rice plasma membrane 87.68 87.17
Os05t0436400-03 Rice plasma membrane 72.14 86.01
EES04366 Sorghum golgi, plasma membrane 85.92 85.17
Zm00001d015006_P004 Maize plasma membrane 84.16 82.71
CDX88296 Canola plasma membrane 70.97 81.76
GSMUA_Achr5P08750_001 Banana plasma membrane 82.4 81.45
KXG37644 Sorghum plasma membrane 83.87 81.02
PGSC0003DMT400024446 Potato plasma membrane 79.77 80.95
KRH52673 Soybean plasma membrane 79.77 79.77
CDY03017 Canola plasma membrane 78.3 79.7
Solyc11g064790.1.1 Tomato plasma membrane 79.18 79.65
VIT_06s0009g03520.t01 Wine grape plasma membrane 79.47 79.47
CDY45179 Canola plasma membrane 78.01 79.4
Bra024788.1-P Field mustard plasma membrane 78.01 79.4
PGSC0003DMT400058489 Potato plasma membrane 78.59 79.29
KRH62014 Soybean endoplasmic reticulum 79.18 79.18
Solyc01g008820.2.1 Tomato plasma membrane 78.3 78.99
CDY60831 Canola plasma membrane 77.71 78.87
CDY17419 Canola plasma membrane 77.42 78.57
AT2G03120.1 Thale cress plasma membrane 78.89 78.2
Bra026567.1-P Field mustard plasma membrane 78.3 77.84
CDY09342 Canola plasma membrane 78.3 77.84
KRH16232 Soybean plasma membrane 77.71 77.71
CDY64408 Canola plasma membrane 78.01 77.55
Bra017402.1-P Field mustard golgi, plasma membrane 35.19 76.43
GSMUA_Achr1P24450_001 Banana plasma membrane 63.93 71.71
CDY03016 Canola extracellular, golgi, plasma membrane 25.22 65.65
Zm00001d015005_P002 Maize plasma membrane 43.4 62.18
Zm00001d054017_P003 Maize plasma membrane 86.51 54.33
OQU87114 Sorghum plasma membrane 42.52 40.28
TraesCS7B01G181000.2 Wheat plasma membrane 29.33 26.88
TraesCS6B01G451100.1 Wheat plasma membrane 24.93 15.57
TraesCS7B01G489700.3 Wheat plasma membrane, vacuole 25.81 15.38
TraesCS3B01G455800.1 Wheat plasma membrane, plastid 23.75 14.36
Protein Annotations
EnsemblPlants:TraesCS6B01G064500.2EnsemblPlantsGene:TraesCS6B01G064500GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPPPANTHER:PTHR12174
PANTHER:PTHR12174:SF23PFAM:PF04258PFscan:PS51257SEG:segSMART:SM00730TMHMM:TMhelix
MapMan:18.10.1.4:::::
Description
No Description!
Coordinates
chr6B:+:42746498..42750830
Molecular Weight (calculated)
37409.2 Da
IEP (calculated)
8.556
GRAVY (calculated)
0.594
Length
341 amino acids
Sequence
(BLAST)
001: MKTHERAANL ALAGLSLAPL VINVNPNLNV ILTACLTVYV GCYRSVKATP PSETMSKEHA MRYPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIA
101: ALCATLLPSI KRFLPEGWND NVIVWRAPYF DSLSVEFTKS QVVASIPGFF FCVWYAMKKH WLANNVLGVA FCIQGIEMLS LGSFKTGGIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTADAAR PFSMLGLGDI VIPGIFVALA LRFDVSRGIK SRGYFNSAFL GYTAGLTVTI VVMNWFRAAQ PALLYIVPGV
301: IGFVAVHCLW NGEVKPLLEF TEAQADDKEG GDPNHESKKA D
Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)
001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
Arabidopsis Description
SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.