Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 8
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62014 | Soybean | endoplasmic reticulum | 98.24 | 98.24 |
| KRH16232 | Soybean | plasma membrane | 93.26 | 93.26 |
| VIT_06s0009g03520.t01 | Wine grape | plasma membrane | 89.44 | 89.44 |
| PGSC0003DMT400024446 | Potato | plasma membrane | 85.04 | 86.31 |
| CDX88296 | Canola | plasma membrane | 74.19 | 85.47 |
| Solyc11g064790.1.1 | Tomato | plasma membrane | 84.75 | 85.25 |
| PGSC0003DMT400058489 | Potato | plasma membrane | 83.28 | 84.02 |
| CDY60831 | Canola | plasma membrane | 82.7 | 83.93 |
| Bra024788.1-P | Field mustard | plasma membrane | 82.4 | 83.88 |
| CDY45179 | Canola | plasma membrane | 82.4 | 83.88 |
| CDY17419 | Canola | plasma membrane | 82.4 | 83.63 |
| CDY03017 | Canola | plasma membrane | 82.11 | 83.58 |
| Solyc01g008820.2.1 | Tomato | plasma membrane | 82.7 | 83.43 |
| AT2G03120.1 | Thale cress | plasma membrane | 83.28 | 82.56 |
| CDY09342 | Canola | plasma membrane | 81.82 | 81.34 |
| Bra026567.1-P | Field mustard | plasma membrane | 81.82 | 81.34 |
| CDY64408 | Canola | plasma membrane | 81.82 | 81.34 |
| Os02t0117400-01 | Rice | plasma membrane | 80.65 | 80.17 |
| TraesCS6B01G064500.2 | Wheat | plasma membrane | 79.77 | 79.77 |
| TraesCS6B01G064600.2 | Wheat | plasma membrane | 79.47 | 79.47 |
| Os05t0436400-03 | Rice | plasma membrane | 66.57 | 79.37 |
| EES04366 | Sorghum | golgi, plasma membrane | 80.06 | 79.36 |
| HORVU6Hr1G009670.1 | Barley | plasma membrane | 79.18 | 78.95 |
| TraesCS3D01G492200.1 | Wheat | plasma membrane | 79.47 | 78.78 |
| Zm00001d015006_P004 | Maize | plasma membrane | 80.06 | 78.67 |
| TraesCS3B01G545500.1 | Wheat | plasma membrane | 79.18 | 78.49 |
| TraesCSU01G107100.2 | Wheat | plasma membrane | 78.59 | 78.36 |
| TraesCS6A01G048100.2 | Wheat | plasma membrane | 78.01 | 77.78 |
| KXG37644 | Sorghum | plasma membrane | 79.77 | 77.05 |
| HORVU3Hr1G108010.6 | Barley | plasma membrane | 77.42 | 76.3 |
| GSMUA_Achr4P16430_001 | Banana | extracellular, plasma membrane, vacuole | 26.69 | 65.0 |
| Zm00001d015005_P002 | Maize | plasma membrane | 41.35 | 59.24 |
| Zm00001d054017_P003 | Maize | plasma membrane | 80.65 | 50.64 |
| OQU87114 | Sorghum | plasma membrane | 39.3 | 37.22 |
| KRH77554 | Soybean | extracellular, golgi | 16.42 | 32.94 |
| KRH35289 | Soybean | endoplasmic reticulum, plasma membrane | 30.21 | 27.69 |
| KRG91538 | Soybean | endoplasmic reticulum, plasma membrane | 29.91 | 27.42 |
| KRH27921 | Soybean | plasma membrane | 25.81 | 16.21 |
| KRG93116 | Soybean | plasma membrane | 24.05 | 15.95 |
| KRH46863 | Soybean | endoplasmic reticulum | 24.63 | 15.85 |
| KRH36351 | Soybean | plasma membrane | 24.05 | 15.77 |
| KRH65010 | Soybean | plasma membrane | 24.93 | 15.68 |
| KRH01823 | Soybean | plasma membrane | 24.34 | 15.66 |
| KRH48125 | Soybean | plasma membrane | 24.63 | 15.53 |
| KRH40447 | Soybean | plasma membrane | 24.34 | 15.4 |
| KRH00766 | Soybean | plasma membrane | 24.34 | 15.4 |
| KRH54524 | Soybean | plasma membrane | 9.38 | 12.65 |
| KRH66530 | Soybean | golgi, plasma membrane, plastid | 6.45 | 11.22 |
| KRH77552 | Soybean | plasma membrane | 8.8 | 8.04 |
| KRH61017 | Soybean | cytosol | 12.32 | 5.39 |
Protein Annotations
| EntrezGene:100784956 | MapMan:18.10.1.4 | MEROPS:A22.A15 | EMBL:ACUP02003427 | EnsemblPlantsGene:GLYMA_06G081900 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005764 | GO:GO:0005765 | GO:GO:0005773 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0030660 | GO:GO:0071458 | GO:GO:0071556 | UniProt:I1K992 | ProteinID:KRH52672.1 | EnsemblPlants:KRH52673 |
| ProteinID:KRH52673 | ProteinID:KRH52673.1 | PFAM:PF04258 | PANTHER:PTHR12174 | PANTHER:PTHR12174:SF23 | InterPro:Peptidase_A22B_SPP |
| InterPro:Preselin/SPP | SMART:SM00730 | TMHMM:TMhelix | UniParc:UPI000233A73E | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:6295333..6301050
Molecular Weight (calculated)
37876.8 Da
IEP (calculated)
8.689
GRAVY (calculated)
0.563
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNTERIANL ALAGLTLAPL VVKVDPNLNV ILTACLTVFV GCYRSVKPTP PTETMSNEHA MRFPFVGSAM LLSLFLLFKF LSKDLVNTVL TGYFFVLGIV
101: ALSATLLPFI KRFLPKHWND DVIVWHFPYF RSLEIEFTKS QVVAGIPGTF FCAWYALRKH WLANNILGLA FCIQGIEMLS LGSFKTGAIL LAGLFVYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTADSAR PFSMLGLGDI VIPGIFVALA LRFDVSRGKQ PQYFKSAFVG YTVGLVLTIV VMNWFQAAQP ALLYIVPSVI
301: GFLAAHCLWN GDVKQLLEFD ESKTANSPQE SDDDKSSKKV E
101: ALSATLLPFI KRFLPKHWND DVIVWHFPYF RSLEIEFTKS QVVAGIPGTF FCAWYALRKH WLANNILGLA FCIQGIEMLS LGSFKTGAIL LAGLFVYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTADSAR PFSMLGLGDI VIPGIFVALA LRFDVSRGKQ PQYFKSAFVG YTVGLVLTIV VMNWFQAAQP ALLYIVPSVI
301: GFLAAHCLWN GDVKQLLEFD ESKTANSPQE SDDDKSSKKV E
001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
Arabidopsis Description
SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.