Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11076 | Soybean | cytosol | 78.02 | 26.01 |
| KRH21197 | Soybean | cytosol, peroxisome, plasma membrane | 75.82 | 25.27 |
| KRH59036 | Soybean | plasma membrane | 67.03 | 22.59 |
| KRH42926 | Soybean | plasma membrane | 67.03 | 22.26 |
| Solyc03g005980.2.1 | Tomato | plasma membrane | 63.74 | 20.94 |
| PGSC0003DMT400071510 | Potato | plasma membrane | 63.74 | 20.94 |
| KRH42923 | Soybean | extracellular | 61.54 | 20.66 |
| KRH59035 | Soybean | plasma membrane | 60.44 | 20.3 |
| VIT_10s0003g01830.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 58.24 | 18.79 |
| Solyc02g071920.2.1 | Tomato | plasma membrane | 58.24 | 18.28 |
| PGSC0003DMT400073246 | Potato | plasma membrane | 58.24 | 18.28 |
| AT4G19030.1 | Thale cress | plasma membrane | 59.34 | 18.24 |
| CDY01565 | Canola | cytosol, peroxisome, plasma membrane | 59.34 | 18.12 |
| CDX78905 | Canola | cytosol, peroxisome, plasma membrane | 58.24 | 17.85 |
| Bra013361.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 58.24 | 17.85 |
| CDX98596 | Canola | cytosol, peroxisome, plasma membrane | 58.24 | 17.79 |
| Bra012567.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 58.24 | 17.79 |
| CDX99411 | Canola | cytosol, peroxisome, plasma membrane | 57.14 | 17.51 |
| KRH50367 | Soybean | plasma membrane | 48.35 | 16.79 |
| KRH47396 | Soybean | plasma membrane | 32.97 | 16.39 |
| AT4G18910.1 | Thale cress | golgi, peroxisome, vacuole | 52.75 | 16.33 |
| KRH47369 | Soybean | mitochondrion, plastid | 31.87 | 15.76 |
| KRH15118 | Soybean | plasma membrane | 45.05 | 15.71 |
| KRH18910 | Soybean | plasma membrane | 42.86 | 15.54 |
| TraesCS7B01G272700.1 | Wheat | plasma membrane | 46.15 | 15.05 |
| TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 46.15 | 15.05 |
| TraesCS7A01G355000.1 | Wheat | peroxisome | 45.05 | 14.7 |
| KRH73019 | Soybean | cytosol, peroxisome, plasma membrane | 40.66 | 14.18 |
| KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 45.05 | 14.09 |
| KRH16737 | Soybean | cytosol, peroxisome, vacuole | 41.76 | 14.07 |
| KRH47366 | Soybean | cytosol, plasma membrane, vacuole | 31.87 | 13.36 |
| KRH40096 | Soybean | plastid | 40.66 | 12.63 |
| KRH01175 | Soybean | plastid | 40.66 | 12.54 |
| KRH32130 | Soybean | plasma membrane | 37.36 | 12.32 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 42.86 | 12.3 |
| KRG91709 | Soybean | plastid | 31.87 | 11.37 |
| Os06t0552700-01 | Rice | cytosol, peroxisome, plastid | 34.07 | 11.36 |
| KRH71310 | Soybean | plasma membrane | 35.16 | 10.81 |
| KRH44534 | Soybean | plastid | 36.26 | 10.78 |
| GSMUA_Achr4P10230_001 | Banana | plastid | 36.26 | 10.51 |
| KRH35064 | Soybean | plastid | 34.07 | 10.37 |
| KRH09661 | Soybean | plasma membrane, plastid | 34.07 | 10.2 |
| HORVU7Hr1G088900.1 | Barley | cytosol, golgi, plasma membrane | 12.09 | 5.21 |
| KRH15764 | Soybean | endoplasmic reticulum, extracellular, plastid, vacuole | 5.49 | 4.81 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | EMBL:ACUP02005016 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | EnsemblPlantsGene:GLYMA_08G260700 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | UniProt:I1KWU4 | InterPro:IPR023271 | EnsemblPlants:KRH45251 |
| ProteinID:KRH45251 | ProteinID:KRH45251.1 | InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF144 | SUPFAM:SSF81338 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI00023CB221 | : |
Description
hypothetical protein
Coordinates
chr8:+:23903877..23904705
Molecular Weight (calculated)
10170.6 Da
IEP (calculated)
9.863
GRAVY (calculated)
0.335
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MVVFFWCLSL VQFHMLNLEV IKPITGASMN PARSLGPAIV HNEYKGIWIY LVSPTLGVVA GTWAYNFIRY TNKPVHEITK SASFLKGGEA K
001: MADISGNGYG NAREEVVMVN LKDEVEHQQE MEDIHNPRPL KKQDSLLSVS VPFLQKLIAE FLGTYFLVFT GCASVVVNMQ NDNVVTLPGI AIVWGLTIMV
101: LIYSLGHISG AHINPAVTIA FASCGRFPLK QVPAYVISQV IGSTLAAATL RLLFGLDHDV CSGKHDVFIG SSPVGSDLQA FTMEFIVTFY LMFIISGVAT
201: DNRAIGELAG LAIGSTVLLN VLIAAPVSSA SMNPGRSLGP ALVYGCYKGI WIYLVAPTLG AIAGAWVYNT VRYTDKPLRE ITKSGSFLKT VRIGST
101: LIYSLGHISG AHINPAVTIA FASCGRFPLK QVPAYVISQV IGSTLAAATL RLLFGLDHDV CSGKHDVFIG SSPVGSDLQA FTMEFIVTFY LMFIISGVAT
201: DNRAIGELAG LAIGSTVLLN VLIAAPVSSA SMNPGRSLGP ALVYGCYKGI WIYLVAPTLG AIAGAWVYNT VRYTDKPLRE ITKSGSFLKT VRIGST
Arabidopsis Description
NIP1-1NIP11 [Source:UniProtKB/TrEMBL;Acc:A0A221J3M9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.