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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH08190
KRH22653
KRH26074
KRH26664
KRH27209
KRH28715
KRH55334
KRH65384
KRH69884
KRH76164
KRH76747

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04340.1 KRH26074 AT1G03630.1 21798944
AT1G04340.1 KRH27209 AT1G03630.1 21798944
AT1G04340.1 KRH55334 AT1G03630.1 21798944
AT1G04340.1 KRH08190 AT3G50910.1 21798944
AT1G04340.1 KRH28715 AT3G50910.1 21798944
AT1G04340.1 KRH69884 AT3G50910.1 21798944
AT1G04340.1 KRH76747 AT3G50910.1 21798944
AT5G43460.1 KRH65384 AT3G60600.1 21798944
AT5G43460.1 KRH76164 AT3G60600.1 21798944
AT5G43460.1 KRH22653 AT5G22290.1 21798944
AT5G43460.1 KRH26664 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH31721 Soybean endoplasmic reticulum 96.82 96.82
KRH34500 Soybean extracellular 77.07 77.07
KRG92302 Soybean extracellular 76.43 76.43
VIT_05s0049g00200.t01 Wine grape extracellular 70.06 70.06
AT5G43460.1 Thale cress extracellular 63.06 64.29
CDY59304 Canola plasma membrane 60.51 60.51
Bra015305.1-P Field mustard extracellular, plasma membrane, vacuole 61.15 59.26
Bra027498.1-P Field mustard plasma membrane 59.24 59.24
CDY32939 Canola plasma membrane 59.24 59.24
CDY18220 Canola extracellular, plasma membrane, vacuole 60.51 58.64
CDY60669 Canola extracellular, plasma membrane, vacuole 60.51 58.64
KRH67349 Soybean plasma membrane 58.6 58.6
KRG95647 Soybean plasma membrane 58.6 58.6
AT1G04340.1 Thale cress plasma membrane 58.6 57.86
KRH32166 Soybean endoplasmic reticulum 57.32 57.69
CDX86640 Canola extracellular, plasma membrane, vacuole 59.24 56.71
CDY15499 Canola plasma membrane 59.24 56.36
Bra030565.1-P Field mustard plasma membrane 59.24 56.36
GSMUA_Achr1P01370_001 Banana extracellular 55.41 55.77
Os03t0149200-01 Rice extracellular 55.41 55.41
GSMUA_Achr11P... Banana endoplasmic reticulum, extracellular, plasma membrane 55.41 55.41
GSMUA_Achr4P26720_001 Banana extracellular 54.78 55.13
Solyc06g053660.2.1 Tomato plasma membrane 54.78 54.78
KRH19536 Soybean endoplasmic reticulum 54.14 54.49
Os04t0181100-01 Rice plasma membrane 53.5 53.5
GSMUA_Achr2P04100_001 Banana extracellular 53.5 53.16
TraesCS4D01G312900.1 Wheat extracellular 52.87 52.87
HORVU4Hr1G080140.1 Barley extracellular 52.87 52.87
OQU81217 Sorghum extracellular 52.87 52.87
KRH73866 Soybean plastid 49.68 52.35
TraesCS4B01G316300.1 Wheat extracellular 52.23 52.23
TraesCS4A01G415500.1 Wheat extracellular 52.23 52.23
Zm00001d048402_P001 Maize extracellular, golgi, plasma membrane 52.23 52.23
EER92848 Sorghum extracellular 52.23 52.23
TraesCS2D01G029000.1 Wheat extracellular 51.59 51.59
GSMUA_Achr8P14320_001 Banana plasma membrane 51.59 51.27
Zm00001d027680_P003 Maize endoplasmic reticulum, extracellular, plasma membrane 53.5 51.22
TraesCS2A01G026900.1 Wheat extracellular 50.96 50.96
TraesCS2B01G040200.1 Wheat extracellular 50.96 50.96
Zm00001d018662_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 50.32 49.38
Zm00001d032568_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.76 49.07
Os10t0445500-01 Rice plasma membrane 49.04 48.73
Zm00001d032483_P001 Maize endoplasmic reticulum, extracellular, vacuole 35.03 44.35
CDY10063 Canola plasma membrane 46.5 40.33
PGSC0003DMT400042097 Potato cytosol 45.86 36.92
Zm00001d025020_P001 Maize extracellular, golgi, plasma membrane 50.32 32.64
Protein Annotations
EMBL:ACUP02012610EnsemblPlants:KRG90387EnsemblPlantsGene:GLYMA_20G088200GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:HR_lesionPANTHER:PTHR31474PANTHER:PTHR31474:SF4PFAM:PF05514ProteinID:KRG90387ProteinID:KRG90387.1
SEG:segSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000233DA50UniProt:I1NER1MapMan:35.2
Description
hypothetical protein
Coordinates
chr20:-:32937035..32939614
Molecular Weight (calculated)
17487.9 Da
IEP (calculated)
10.808
GRAVY (calculated)
0.431
Length
157 amino acids
Sequence
(BLAST)
001: MGFSSFLGRV LFASLFILTA WQMFNEFDAN GGPISKELIP KLTVVKKNLS SKLGVALPDI DARQFIATII FLKGVGGILF VFGSTFGSFL LLLHLAITTP
101: LLYDFYNYRP GKPKYNQLLN DFLLNTALFG ALLFFIGMKN SIPRSQLRKK TPKAKTV
Best Arabidopsis Sequence Match ( AT5G43460.1 )
(BLAST)
001: MGFFSFLGRV LFASLFILSA WQMFNDGGPA AKELAPKLDL VKAHLSSRLG VTLPKIEVRQ VVATIIALKG VGGLLFVIGN TFGAYLLASY LVVFGPILYD
101: FYNYGPQERH FSLLLTEFLQ SVALFGALLF FIGMKNSTPA KKNLKKRTPK PKAA
Arabidopsis Description
At5g43460/MWF20_18 [Source:UniProtKB/TrEMBL;Acc:Q9LSW5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.