Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28715 | Soybean | cytosol | 81.19 | 86.34 |
| KRH08190 | Soybean | nucleus | 65.37 | 65.37 |
| Bra036850.1-P | Field mustard | plastid | 44.04 | 46.27 |
| CDX77962 | Canola | nucleus, plastid | 44.04 | 46.27 |
| CDX73773 | Canola | cytosol | 42.66 | 45.15 |
| Zm00001d020667_P001 | Maize | nucleus | 13.76 | 45.11 |
| Bra012880.1-P | Field mustard | nucleus | 41.28 | 44.12 |
| VIT_04s0023g02110.t01 | Wine grape | endoplasmic reticulum | 50.23 | 43.98 |
| CDX90677 | Canola | nucleus | 41.05 | 43.87 |
| AT3G50910.1 | Thale cress | cytosol | 43.81 | 42.73 |
| CDY28989 | Canola | nucleus | 41.05 | 42.72 |
| Bra037167.1-P | Field mustard | mitochondrion | 20.64 | 42.65 |
| Solyc02g085000.2.1 | Tomato | nucleus | 43.12 | 40.69 |
| GSMUA_Achr6P08980_001 | Banana | nucleus | 37.84 | 40.24 |
| GSMUA_Achr2P22980_001 | Banana | cytosol, nucleus, peroxisome, plastid | 37.84 | 39.66 |
| PGSC0003DMT400009054 | Potato | nucleus, plastid | 42.66 | 38.67 |
| GSMUA_Achr1P12060_001 | Banana | plastid | 34.86 | 38.58 |
| CDY67893 | Canola | nucleus | 29.82 | 37.68 |
| CDY18608 | Canola | nucleus | 30.5 | 36.64 |
| AT5G66480.1 | Thale cress | plastid | 36.24 | 35.59 |
| KRH69884 | Soybean | nucleus | 58.72 | 35.36 |
| TraesCS6D01G252200.1 | Wheat | nucleus | 36.01 | 34.97 |
| TraesCS6A01G272000.1 | Wheat | nucleus | 36.24 | 34.96 |
| Os02t0704600-01 | Rice | nucleus | 36.24 | 34.65 |
| HORVU6Hr1G068770.1 | Barley | nucleus | 36.01 | 34.58 |
| TraesCS6B01G299600.1 | Wheat | nucleus | 36.01 | 34.28 |
| OQU85551 | Sorghum | cytosol, plastid | 35.09 | 33.77 |
| OQU78405 | Sorghum | nucleus | 32.8 | 33.57 |
| Zm00001d051562_P001 | Maize | plastid | 33.26 | 32.88 |
| Zm00001d038964_P001 | Maize | nucleus | 31.19 | 32.0 |
| Zm00001d017768_P006 | Maize | cytosol | 33.95 | 31.16 |
Protein Annotations
| EMBL:ACUP02000639 | EnsemblPlants:KRH76747 | EnsemblPlantsGene:GLYMA_01G172000 | EntrezGene:100792599 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | ncoils:Coil | PANTHER:PTHR35490 | ProteinID:KRH76747 | ProteinID:KRH76747.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0002336DAE | UniProt:I1J8S3 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:50923815..50928021
Molecular Weight (calculated)
48377.4 Da
IEP (calculated)
4.549
GRAVY (calculated)
-0.622
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTFTAMALD RLIEPGASKP VDKSAPTSMP VPNSQKLERS TSAPAKKSKV PQPPLKPALY TTPEVTPLPD APSSFPPSPY IINHKRRGPR LLKSSSEASA
101: LSEVNIRCDD DNDKSVDAVV TSSAGDLQVT STKPELVKEE KVNGVYDGQL DRSNDVDHAN GHRETGSGSL TNGLLKEKPP ALNLDRVSEV EDFFYPLDSM
201: SFSSNTDGEE NAGTELSMKL SSPSTEFYDA WEELSSEGMS QNSTYDIEAE LREVRLSLLV EIEKRKQAEE SINNMRSQWE SIRQGLYQAG IILPAYLNAT
301: AEDEQLTSDP VEDLCQQVYI ARFISNAIGK GIARAELETE MEAQLEAKNF EIARLLDRLH CYETMNREMS QRNQEAVEMA RCERQRSSRR QRWIWGCITT
401: VIALSTAAIA WSYLPTSKGS SSADHDLVPE YDDTAK
101: LSEVNIRCDD DNDKSVDAVV TSSAGDLQVT STKPELVKEE KVNGVYDGQL DRSNDVDHAN GHRETGSGSL TNGLLKEKPP ALNLDRVSEV EDFFYPLDSM
201: SFSSNTDGEE NAGTELSMKL SSPSTEFYDA WEELSSEGMS QNSTYDIEAE LREVRLSLLV EIEKRKQAEE SINNMRSQWE SIRQGLYQAG IILPAYLNAT
301: AEDEQLTSDP VEDLCQQVYI ARFISNAIGK GIARAELETE MEAQLEAKNF EIARLLDRLH CYETMNREMS QRNQEAVEMA RCERQRSSRR QRWIWGCITT
401: VIALSTAAIA WSYLPTSKGS SSADHDLVPE YDDTAK
001: MPTFSAIALD RMLEPGASTS VESVPSTTNL FYSKPPISKL EKGKGKLPNE RTVTRPLMSP ALYATPDAIP LPNSPSSFPP SPYIINHKSR GPPRLLKSSS
101: EANVVSSSHQ KTLEEETITA ETDVKVSPRR RSTSFSFPIT EVTEDDYSNG VHARTVGNYN FDGIVDGPVG NWSPLDGKSG NGKSELDNAA NGLERVNGLS
201: EPVPIKTDKE SESEDFYDPG ESASFTSNTD VEGDAGDESS QRLATPVGEF YDAWDELSTD SGMQSSVNNI ESELSEIRLS LLMEIEKRKQ TEEALEQMQI
301: HWQRLREQMA QVGLFVPIDP TASTNNMNLS EELRCQLEIA RFVSDSLGRG MAKAEVEMEM ESMLETKNFE ITRLSDRLHY YEAVNREMSQ RNQEAIEVAR
401: RERQKRKKRQ RWIWGSIAAT ITLGSAALAW SYIPAAKPSS EVSLKDE
101: EANVVSSSHQ KTLEEETITA ETDVKVSPRR RSTSFSFPIT EVTEDDYSNG VHARTVGNYN FDGIVDGPVG NWSPLDGKSG NGKSELDNAA NGLERVNGLS
201: EPVPIKTDKE SESEDFYDPG ESASFTSNTD VEGDAGDESS QRLATPVGEF YDAWDELSTD SGMQSSVNNI ESELSEIRLS LLMEIEKRKQ TEEALEQMQI
301: HWQRLREQMA QVGLFVPIDP TASTNNMNLS EELRCQLEIA RFVSDSLGRG MAKAEVEMEM ESMLETKNFE ITRLSDRLHY YEAVNREMSQ RNQEAIEVAR
401: RERQKRKKRQ RWIWGSIAAT ITLGSAALAW SYIPAAKPSS EVSLKDE
Arabidopsis Description
AT3g50910/F18B3_190 [Source:UniProtKB/TrEMBL;Acc:Q94BX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.