Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- cytosol 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15025 | Soybean | cytosol | 92.84 | 93.39 |
| KRH14969 | Soybean | cytosol | 62.99 | 87.19 |
| CDX70131 | Canola | cytosol | 13.13 | 68.75 |
| CDY14956 | Canola | cytosol | 22.09 | 66.67 |
| CDX80972 | Canola | plastid | 66.27 | 65.1 |
| Bra005866.1-P | Field mustard | cytosol, plastid | 65.97 | 65.0 |
| CDY11339 | Canola | cytosol, plastid | 65.97 | 65.0 |
| AT5G05760.1 | Thale cress | cytosol | 63.58 | 63.39 |
| VIT_13s0067g00280.t01 | Wine grape | plastid | 73.43 | 62.28 |
| PGSC0003DMT400047329 | Potato | cytosol, plastid | 61.19 | 61.19 |
| Solyc07g054140.2.1 | Tomato | cytosol, plastid | 56.42 | 59.43 |
| KRH61871 | Soybean | endoplasmic reticulum | 51.34 | 51.04 |
| KRH52535 | Soybean | cytosol, plastid | 51.04 | 50.89 |
| KRH52536 | Soybean | endoplasmic reticulum | 51.34 | 50.74 |
| KRH61874 | Soybean | endoplasmic reticulum | 51.04 | 50.44 |
Protein Annotations
| Gene3D:1.20.5.110 | EntrezGene:100777383 | MapMan:22.7.1.3 | EMBL:ACUP02001268 | EnsemblPlantsGene:GLYMA_02G255700 | GO:GO:0000139 |
| GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0006888 | GO:GO:0006906 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0031201 | GO:GO:0048278 | UniProt:I1JI73 | InterPro:IPR000727 |
| EnsemblPlants:KRH73168 | ProteinID:KRH73168 | ProteinID:KRH73168.1 | PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 |
| PANTHER:PTHR19957 | PANTHER:PTHR19957:SF117 | SMART:SM00397 | InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS |
| TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI0001CAA51E | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr2:+:44248883..44253202
Molecular Weight (calculated)
37220.1 Da
IEP (calculated)
7.909
GRAVY (calculated)
-0.457
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSYRDRTS EFRLLSETMK KIGGPVQPEN PPSTSRGGES SYSRSEFNRK ASRIGLGIHE TSQKIARLAQ LARKSSMFND PAVEIQELTV LIKNEITTLN
101: SALSDLQTIQ NTDMADGGYS QDTIVHSTAV CDDLKSKLMG ATKHLQDVLT ARTENIKAHE NRKQIFSKNA SRENPFQHQP KPANEPPPWS NSSNASESLQ
201: QESALPSNGA PVGNQLRRRL AVDNTPSQQM EMSMVQQVVP RHENYAQSRA TALHNVESTI TELSGIFSHL ATMVAHQGEL AIRIDDNMDE SLANVEGAHS
301: SLLRHLNRIS SNRWLLIKIF AILILFLTIF IFFVA
101: SALSDLQTIQ NTDMADGGYS QDTIVHSTAV CDDLKSKLMG ATKHLQDVLT ARTENIKAHE NRKQIFSKNA SRENPFQHQP KPANEPPPWS NSSNASESLQ
201: QESALPSNGA PVGNQLRRRL AVDNTPSQQM EMSMVQQVVP RHENYAQSRA TALHNVESTI TELSGIFSHL ATMVAHQGEL AIRIDDNMDE SLANVEGAHS
301: SLLRHLNRIS SNRWLLIKIF AILILFLTIF IFFVA
001: MGSTFRDRTV ELHSLSQTLK KIGAIPSVHQ DEDDPASSKR SSPGSEFNKK ASRIGLGIKE TSQKITRLAK LAKQSTIFND RTVEIQELTV LIRNDITGLN
101: MALSDLQTLQ NMELADGNYS QDQVGHYTAV CDDLKTRLMG ATKQLQDVLT TRSENMKAHE NRKQLFSTKN AVDSPPQNNA KSVPEPPPWS SSSNPFGNLQ
201: QPLLPPLNTG APPGSQLRRR SAIENAPSQQ MEMSLLQQTV PKQENYSQSR AVALHSVESR ITELSGIFPQ LATMVTQQGE LAIRIDDNMD ESLVNVEGAR
301: SALLQHLTRI SSNRWLMMKI FAVIILFLIV FLFFVA
101: MALSDLQTLQ NMELADGNYS QDQVGHYTAV CDDLKTRLMG ATKQLQDVLT TRSENMKAHE NRKQLFSTKN AVDSPPQNNA KSVPEPPPWS SSSNPFGNLQ
201: QPLLPPLNTG APPGSQLRRR SAIENAPSQQ MEMSLLQQTV PKQENYSQSR AVALHSVESR ITELSGIFPQ LATMVTQQGE LAIRIDDNMD ESLVNVEGAR
301: SALLQHLTRI SSNRWLMMKI FAVIILFLIV FLFFVA
Arabidopsis Description
SYP31Syntaxin-31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFK1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.