CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18029	Canola	cytosol	44.12	85.23
VIT_05s0077g01840.t01	Wine grape	cytosol	51.47	84.95
KRH68137	Soybean	nucleus	52.65	84.43
KRH31849	Soybean	nucleus	52.35	83.96
KRH69269	Soybean	nucleus	52.35	83.96
KRH68219	Soybean	nucleus	51.47	82.55
KRG96473	Soybean	nucleus	50.88	81.6
KRG96400	Soybean	nucleus	50.88	81.6
Solyc09g075430.2.1	Tomato	nucleus, unclear	52.06	81.19
KRH31847	Soybean	nucleus	50.59	81.13
CDX90946	Canola	cytosol	46.76	81.12
Bra000887.1-P	Field mustard	cytosol	45.0	80.95
CDY52784	Canola	cytosol	47.35	80.9
Bra036285.1-P	Field mustard	cytosol	47.35	80.9
KRH69268	Soybean	nucleus	50.29	80.66
HORVU4Hr1G049670.2	Barley	cytosol	48.24	80.39
CDY22039	Canola	cytosol	47.06	80.0
PGSC0003DMT400046201	Potato	mitochondrion	50.29	79.91
Solyc06g009210.2.1	Tomato	nucleus, plastid, unclear	50.0	79.81
Os03t0337800-01	Rice	nucleus	48.82	79.81
HORVU2Hr1G018700.1	Barley	plasma membrane	48.82	79.43
EES06302	Sorghum	cytosol, mitochondrion	48.24	79.23
TraesCS2A01G108900.1	Wheat	cytosol	48.53	78.95
TraesCS2D01G109000.1	Wheat	golgi	48.53	78.95
EER89359	Sorghum	cytosol, mitochondrion	48.24	78.85
Os03t0579300-00	Rice	nucleus	47.65	78.64
PGSC0003DMT400081324	Potato	cytosol, mitochondrion	50.88	78.64
EES03157	Sorghum	cytosol, mitochondrion	47.65	78.26
TraesCS2A01G094200.1	Wheat	cytosol	48.53	78.2
TraesCS2D01G092800.1	Wheat	nucleus	48.82	77.93
AT4G02230.1	Thale cress	cytosol, mitochondrion	47.06	76.92
CDY65792	Canola	cytosol	48.53	76.74
CDY15438	Canola	cytosol	48.53	76.39
AT1G02780.1	Thale cress	cytosol	47.94	76.17
CDY37461	Canola	cytosol	48.53	76.04
CDY32478	Canola	cytosol	48.53	76.04
CDX89944	Canola	cytosol	48.53	75.69
Bra030509.1-P	Field mustard	cytosol	48.53	75.69
CDY15263	Canola	cytosol	48.24	75.58
AT3G16780.1	Thale cress	cytosol	46.18	75.12
Bra032586.1-P	Field mustard	cytosol, mitochondrion	44.41	74.75
TraesCS4D01G170100.1	Wheat	cytosol	48.53	72.37
Bra033346.1-P	Field mustard	cytosol	35.88	72.19
GSMUA_Achr1P26610_001	Banana	cytosol	39.71	70.68
CDY01919	Canola	endoplasmic reticulum	37.35	65.46
Solyc09g031760.1.1	Tomato	cytosol	22.65	64.17
CDX92095	Canola	cytosol, plastid	28.82	60.87
Bra022177.1-P	Field mustard	cytosol	36.76	60.1
TraesCS4A01G137200.1	Wheat	cytosol	39.41	59.29
Zm00001d053864_P001	Maize	cytosol	38.53	57.46
CDY28336	Canola	cytosol, plastid	10.88	54.41
TraesCS2B01G419700.1	Wheat	plastid	21.18	41.38
CDX95905	Canola	nucleus	31.76	39.42

Protein Annotations

Gene3D:1.10.1200.240	Gene3D:1.10.1650.10	MapMan:17.1.2.1.20	InterPro:60S_ribosomal_L19/L19e_sf	EMBL:ACUP02000582	EnsemblPlantsGene:GLYMA_01G140100
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0022625	GO:GO:0030529	InterPro:IPR015972	UniProt:K7K3R4	EnsemblPlants:KRH76216	ProteinID:KRH76216
ProteinID:KRH76216.1	PFAM:PF01280	ScanProsite:PS00526	PANTHER:PTHR10722	InterPro:Ribosomal_L19/L19e	InterPro:Ribosomal_L19/L19e_CS
InterPro:Ribosomal_L19/L19e_dom1	InterPro:Ribosomal_L19_euka	SMART:SM01416	SUPFAM:SSF48140	UniParc:UPI0002967B03	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:46808785..46809906

Molecular Weight (calculated)

39673.8 Da

IEP (calculated)

11.347

GRAVY (calculated)

-0.839

Length

340 amino acids

Sequence
(BLAST)

001: MVSLKLQKRL AASVLKCGRG KVWLDPNEVN EISMANSLQN IRKLVEDGFI IRKPTKIHSC LRARRMKEAK KKGRHSGYGK RKGTREARLP TKILWMRRMR
101: VLRRLLRKYR ESKKIDKHMY HDMCMKVKGN VFKNKRAEKA REKTLSDQFE AKRAKNKASR ERKLARRKER LAQGPVDKTS TAPSAPVATA PQSTQAPKKF
201: KKQNKIAWIK WKTVCQPKEK GGLGLKDIKT FNLALIGKWK WNLFQHQGEL RARVLDSKYG GWRSLDASSR VSHESVWWRD LKMTLLHSHQ GQVLQNGTMW
301: KVGCGDRIKF WEDKWVNGEE TLSAKYPRLY LISCQQNQII

Best Arabidopsis Sequence Match ( ATMG00310.1 )
(BLAST)

001: MALPVYAMSC FRLSKLLCKK LTSAMTEFWW SSCENKRKIS WVAWQKLCKS KEDDGGLGFR DLGWFNQALL AKQSFRIIHQ PHTLLSRLLR SRYFPHSSMM
101: ECSVGTRPSY AWRSIIHGRE LLSRGLLRTI GDGIHTKVWL DRWIMDETPL PPLN

Arabidopsis Description

ORF154Uncharacterized mitochondrial protein AtMg00310 [Source:UniProtKB/Swiss-Prot;Acc:P93295]
SUBAcon: [mitochondrion,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.