CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90946	Canola	cytosol	98.3	88.27
CDY52784	Canola	cytosol	93.18	82.41
CDY22039	Canola	cytosol	92.61	81.5
AT4G02230.1	Thale cress	cytosol, mitochondrion	89.77	75.96
CDY37461	Canola	cytosol	93.18	75.58
CDY15438	Canola	cytosol	92.61	75.46
CDY65792	Canola	cytosol	92.05	75.35
CDY15263	Canola	cytosol	92.61	75.12
CDY32478	Canola	cytosol	92.61	75.12
CDX89944	Canola	cytosol	92.61	74.77
VIT_05s0077g01840.t01	Wine grape	cytosol	86.93	74.27
KRG96473	Soybean	nucleus	89.2	74.06
KRH69269	Soybean	nucleus	89.2	74.06
KRH68219	Soybean	nucleus	88.64	73.58
KRH31849	Soybean	nucleus	88.64	73.58
VIT_07s0005g00840.t01	Wine grape	cytosol, mitochondrion	86.93	73.56
PGSC0003DMT400046201	Potato	mitochondrion	89.2	73.36
PGSC0003DMT400081324	Potato	cytosol, mitochondrion	91.48	73.18
KRH68137	Soybean	nucleus	88.07	73.11
KRH31847	Soybean	nucleus	88.07	73.11
HORVU4Hr1G049670.2	Barley	cytosol	84.66	73.04
KRG96400	Soybean	nucleus	87.5	72.64
KRH69268	Soybean	nucleus	87.5	72.64
EES06302	Sorghum	cytosol, mitochondrion	85.23	72.46
TraesCS2D01G109000.1	Wheat	golgi	85.8	72.25
TraesCS2A01G108900.1	Wheat	cytosol	85.8	72.25
Os03t0579300-00	Rice	nucleus	84.09	71.84
Os03t0337800-01	Rice	nucleus	84.66	71.63
HORVU2Hr1G018700.1	Barley	plasma membrane	84.66	71.29
TraesCS2A01G094200.1	Wheat	cytosol	85.23	71.09
EES03157	Sorghum	cytosol, mitochondrion	82.95	70.53
TraesCS2D01G092800.1	Wheat	nucleus	85.23	70.42
EER89359	Sorghum	cytosol, mitochondrion	82.95	70.19
CDY01919	Canola	endoplasmic reticulum	74.43	67.53
TraesCS4D01G170100.1	Wheat	cytosol	84.66	65.35
CDX92095	Canola	cytosol, plastid	51.7	56.52
TraesCS4A01G137200.1	Wheat	cytosol	71.59	55.75
Solyc09g031760.1.1	Tomato	cytosol	37.5	55.0
CDY28336	Canola	cytosol, plastid	21.02	54.41
KRH76216	Soybean	cytosol, mitochondrion	85.23	44.12
CDX95905	Canola	nucleus	59.66	38.32

Protein Annotations

Gene3D:1.10.1200.240	Gene3D:1.10.1650.10	MapMan:17.1.2.1.20	InterPro:60S_ribosomal_L19/L19e_sf	GO:A0A078FY46	UniProt:A0A078FY46
EnsemblPlants:CDY18029	ProteinID:CDY18029	ProteinID:CDY18029.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529
EnsemblPlantsGene:GSBRNA2T00002429001	InterPro:IPR015972	PFAM:PF01280	ScanProsite:PS00526	PANTHER:PTHR10722	PANTHER:PTHR10722:SF11
InterPro:Ribosomal_L19/L19e	InterPro:Ribosomal_L19/L19e_CS	InterPro:Ribosomal_L19/L19e_dom1	SMART:SM01416	SUPFAM:SSF48140	UniParc:UPI0004EE966C
SEG:seg	:	:	:	:	:

Description

BnaC03g31010DRibosomal protein L19 [Source:UniProtKB/TrEMBL;Acc:A0A078FY46]

Coordinates

chrLK032080:+:691950..693284

Molecular Weight (calculated)

20442.4 Da

IEP (calculated)

11.902

GRAVY (calculated)

-1.057

Length

176 amino acids

Sequence
(BLAST)

001: MVSLKLQKRL AASVLKCGKG KVWLDPNEGN DIAMANSRQN IRKLVNDGFI IRKPTKIHSR SRARRMKIAK MKGRHSGYGK RKGTREARLP TKVLWMRRMR
101: VLRRLLKKYR ESKKIDKHMY HDMYMKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVP AAAPPA

Best Arabidopsis Sequence Match ( AT1G02780.1 )
(BLAST)

001: MVSLKLQKRL AASVMKCGKG KVWLDPNESS DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARKMKIAK MKGRHSGYGK RKGTREARLP TKVLWMRRMR
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK

Arabidopsis Description

RPL19A60S ribosomal protein L19-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.