Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G108900.1 | Wheat | cytosol | 70.35 | 76.08 |
| TraesCS2A01G094200.1 | Wheat | cytosol | 69.47 | 74.41 |
| Bra000887.1-P | Field mustard | cytosol | 61.95 | 74.07 |
| GSMUA_Achr8P33790_001 | Banana | cytosol, mitochondrion | 65.49 | 72.91 |
| GSMUA_Achr9P20320_001 | Banana | cytosol | 64.6 | 72.64 |
| GSMUA_Achr7P03780_001 | Banana | cytosol, mitochondrion | 65.49 | 72.2 |
| CDX90946 | Canola | cytosol | 62.39 | 71.94 |
| CDY52784 | Canola | cytosol | 63.27 | 71.86 |
| Bra036285.1-P | Field mustard | cytosol | 63.27 | 71.86 |
| CDY18029 | Canola | cytosol | 55.75 | 71.59 |
| CDY22039 | Canola | cytosol | 63.27 | 71.5 |
| VIT_05s0077g01840.t01 | Wine grape | cytosol | 65.04 | 71.36 |
| VIT_07s0005g00840.t01 | Wine grape | cytosol, mitochondrion | 65.04 | 70.67 |
| KRH68137 | Soybean | nucleus | 65.93 | 70.28 |
| KRH31847 | Soybean | nucleus | 65.93 | 70.28 |
| KRH31849 | Soybean | nucleus | 65.93 | 70.28 |
| KRH69269 | Soybean | nucleus | 65.93 | 70.28 |
| GSMUA_Achr3P00710_001 | Banana | plasma membrane | 63.72 | 70.24 |
| KRG96473 | Soybean | nucleus | 65.49 | 69.81 |
| KRG96400 | Soybean | nucleus | 65.49 | 69.81 |
| KRH69268 | Soybean | nucleus | 65.49 | 69.81 |
| KRH68219 | Soybean | nucleus | 65.04 | 69.34 |
| AT4G02230.1 | Thale cress | cytosol, mitochondrion | 62.83 | 68.27 |
| GSMUA_Achr1P24740_001 | Banana | cytosol | 46.9 | 67.95 |
| Solyc06g009210.2.1 | Tomato | nucleus, plastid, unclear | 63.72 | 67.61 |
| AT3G16780.1 | Thale cress | cytosol | 61.95 | 66.99 |
| PGSC0003DMT400046201 | Potato | mitochondrion | 63.27 | 66.82 |
| CDY65792 | Canola | cytosol | 63.27 | 66.51 |
| AT1G02780.1 | Thale cress | cytosol | 62.39 | 65.89 |
| CDY32478 | Canola | cytosol | 62.83 | 65.44 |
| CDY15438 | Canola | cytosol | 62.39 | 65.28 |
| Bra030509.1-P | Field mustard | cytosol | 62.83 | 65.14 |
| CDX89944 | Canola | cytosol | 62.83 | 65.14 |
| CDY37461 | Canola | cytosol | 62.39 | 64.98 |
| CDY15263 | Canola | cytosol | 62.39 | 64.98 |
| Solyc09g075430.2.1 | Tomato | nucleus, unclear | 62.39 | 64.68 |
| PGSC0003DMT400081324 | Potato | cytosol, mitochondrion | 62.83 | 64.55 |
| Bra032586.1-P | Field mustard | cytosol, mitochondrion | 56.64 | 63.37 |
| Bra033346.1-P | Field mustard | cytosol | 45.58 | 60.95 |
| GSMUA_Achr1P26610_001 | Banana | cytosol | 51.33 | 60.73 |
| VIT_17s0000g02150.t01 | Wine grape | cytosol | 49.12 | 60.66 |
| CDY28336 | Canola | cytosol, plastid | 17.26 | 57.35 |
| CDY01919 | Canola | endoplasmic reticulum | 49.12 | 57.22 |
| Bra022177.1-P | Field mustard | cytosol | 50.88 | 55.29 |
| CDX92095 | Canola | cytosol, plastid | 38.5 | 54.04 |
| Solyc09g031760.1.1 | Tomato | cytosol | 26.55 | 50.0 |
| AT4G16030.1 | Thale cress | cytosol, mitochondrion | 20.8 | 41.23 |
| KRH76216 | Soybean | cytosol, mitochondrion | 59.29 | 39.41 |
| CDX95905 | Canola | nucleus | 44.69 | 36.86 |
Protein Annotations
| Gene3D:1.10.1200.240 | Gene3D:1.10.1650.10 | MapMan:17.1.2.1.20 | InterPro:60S_ribosomal_L19/L19e_sf | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0022625 | InterPro:IPR015972 | PFAM:PF01280 | ScanProsite:PS00526 | PANTHER:PTHR10722 |
| PANTHER:PTHR10722:SF11 | InterPro:Ribosomal_L19/L19e | InterPro:Ribosomal_L19/L19e_CS | InterPro:Ribosomal_L19/L19e_dom1 | InterPro:Ribosomal_L19_euka | SMART:SM01416 |
| SUPFAM:SSF48140 | EnsemblPlantsGene:TraesCS4A01G137200 | EnsemblPlants:TraesCS4A01G137200.1 | TIGR:cd01417 | SEG:seg | : |
Description
No Description!
Coordinates
chr4A:+:196571432..196573329
Molecular Weight (calculated)
26493.0 Da
IEP (calculated)
12.204
GRAVY (calculated)
-0.915
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLKLQKRL ASSVLKCGKG KVWLDPNEVN EISMANSRQN IRKLVKDGFI IRNPQKIHSR SRARRAHEAK QKGRHSGYGK RRGTREARLP TKILWMRRMR
101: VLRRLLCKYR EAKKIDKHMY LKVKGNMFKN KLVLMESIRK SKGEKAREKT LSDQFEAKRV SVPRARQAVK GRLPGGRRGL LRAQGTTPHL LQQQQLLPNL
201: QRHQRRQRSE DLTIKRSVYW VKSVCS
101: VLRRLLCKYR EAKKIDKHMY LKVKGNMFKN KLVLMESIRK SKGEKAREKT LSDQFEAKRV SVPRARQAVK GRLPGGRRGL LRAQGTTPHL LQQQQLLPNL
201: QRHQRRQRSE DLTIKRSVYW VKSVCS
001: MVSLKLQKRL AASVMKCGKG KVWLDPNESS DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARKMKIAK MKGRHSGYGK RKGTREARLP TKVLWMRRMR
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK
Arabidopsis Description
RPL19A60S ribosomal protein L19-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.