Factsheet for Bra032586.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32478	Canola	cytosol	100.0	93.09
CDY37461	Canola	cytosol	99.5	92.63
Bra030509.1-P	Field mustard	cytosol	98.51	91.28
Bra036285.1-P	Field mustard	cytosol	86.63	87.94
Bra000887.1-P	Field mustard	cytosol	78.22	83.6
AT1G02780.1	Thale cress	cytosol	87.13	82.24
VIT_07s0005g00840.t01	Wine grape	cytosol, mitochondrion	83.17	80.77
KRH68137	Soybean	nucleus	84.16	80.19
KRH68219	Soybean	nucleus	83.66	79.72
KRH31849	Soybean	nucleus	83.66	79.72
KRG96473	Soybean	nucleus	83.66	79.72
KRG96400	Soybean	nucleus	83.66	79.72
VIT_05s0077g01840.t01	Wine grape	cytosol	81.19	79.61
KRH69269	Soybean	nucleus	83.17	79.25
KRH31847	Soybean	nucleus	82.18	78.3
KRH69268	Soybean	nucleus	82.18	78.3
Bra033346.1-P	Field mustard	cytosol	64.85	77.51
Os03t0337800-01	Rice	nucleus	79.7	77.4
TraesCS2D01G109000.1	Wheat	golgi	79.7	77.03
TraesCS2A01G108900.1	Wheat	cytosol	79.7	77.03
PGSC0003DMT400046201	Potato	mitochondrion	81.19	76.64
HORVU2Hr1G018700.1	Barley	plasma membrane	79.21	76.56
HORVU4Hr1G049670.2	Barley	cytosol	77.23	76.47
EES06302	Sorghum	cytosol, mitochondrion	78.22	76.33
PGSC0003DMT400081324	Potato	cytosol, mitochondrion	82.67	75.91
TraesCS2A01G094200.1	Wheat	cytosol	79.21	75.83
Os03t0579300-00	Rice	nucleus	77.23	75.73
TraesCS2D01G092800.1	Wheat	nucleus	79.7	75.59
EER89359	Sorghum	cytosol, mitochondrion	77.72	75.48
EES03157	Sorghum	cytosol, mitochondrion	77.23	75.36
TraesCS4D01G170100.1	Wheat	cytosol	78.71	69.74
GSMUA_Achr1P26610_001	Banana	cytosol	65.84	69.63
Bra022177.1-P	Field mustard	cytosol	63.86	62.02
Solyc09g031760.1.1	Tomato	cytosol	33.66	56.67
TraesCS4A01G137200.1	Wheat	cytosol	63.37	56.64
Zm00001d053864_P001	Maize	cytosol	63.86	56.58
KRH76216	Soybean	cytosol, mitochondrion	74.75	44.41
TraesCS2B01G419700.1	Wheat	plastid	30.2	35.06

Protein Annotations

Gene3D:1.10.1200.240	Gene3D:1.10.1650.10	MapMan:17.1.2.1.20	InterPro:60S_ribosomal_L19/L19e_sf	EnsemblPlantsGene:Bra032586	EnsemblPlants:Bra032586.1
EnsemblPlants:Bra032586.1-P	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	GO:GO:0030529
InterPro:IPR015972	UniProt:M4EUV4	PFAM:PF01280	ScanProsite:PS00526	PANTHER:PTHR10722	PANTHER:PTHR10722:SF11
InterPro:Ribosomal_L19/L19e	InterPro:Ribosomal_L19/L19e_CS	InterPro:Ribosomal_L19/L19e_dom1	InterPro:Ribosomal_L19_euka	SMART:SM01416	SUPFAM:SSF48140
UniParc:UPI0002543081	SEG:seg	:	:	:	:

Description

AT1G02780 (E=4e-045) emb2386 | emb2386 (embryo defective 2386); structural constituent of ribosome

Coordinates

chrA09:+:36732482..36733585

Molecular Weight (calculated)

23063.5 Da

IEP (calculated)

11.698

GRAVY (calculated)

-1.095

Length

202 amino acids

Sequence
(BLAST)

001: MVSLKIQKRL AASVMKCGKG KVWLDPNESQ DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARRMKIAK MKGRHSGYGK RKGTREARRL LKKYRESKKI
101: DKHMYHDMYM RVKGNVFKNK RVLMESIHKS KAEKAREKTL SDQFEAKRAK NKASRERKHA RREERLAKGP GGDVAPATAP PAAAAATTTA QTAEVPKKKS
201: KK

Best Arabidopsis Sequence Match ( AT1G02780.1 )
(BLAST)

001: MVSLKLQKRL AASVMKCGKG KVWLDPNESS DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARKMKIAK MKGRHSGYGK RKGTREARLP TKVLWMRRMR
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK

Arabidopsis Description

RPL19A60S ribosomal protein L19-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.