Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G018700.1 | Barley | plasma membrane | 88.16 | 96.17 |
| TraesCS2D01G109000.1 | Wheat | golgi | 88.16 | 96.17 |
| TraesCS2D01G092800.1 | Wheat | nucleus | 87.72 | 93.9 |
| Os03t0579300-00 | Rice | nucleus | 84.21 | 93.2 |
| Zm00001d044287_P001 | Maize | plasma membrane, plastid | 83.77 | 92.27 |
| EER89359 | Sorghum | cytosol, mitochondrion | 83.33 | 91.35 |
| EES06302 | Sorghum | cytosol, mitochondrion | 82.46 | 90.82 |
| GSMUA_Achr7P03780_001 | Banana | cytosol, mitochondrion | 81.58 | 90.73 |
| Zm00001d045069_P001 | Maize | plasma membrane, plastid | 82.46 | 90.38 |
| EES03157 | Sorghum | cytosol, mitochondrion | 82.02 | 90.34 |
| GSMUA_Achr8P33790_001 | Banana | cytosol, mitochondrion | 78.95 | 88.67 |
| GSMUA_Achr9P20320_001 | Banana | cytosol | 78.07 | 88.56 |
| GSMUA_Achr3P00710_001 | Banana | plasma membrane | 79.39 | 88.29 |
| VIT_05s0077g01840.t01 | Wine grape | cytosol | 78.51 | 86.89 |
| KRH68137 | Soybean | nucleus | 80.7 | 86.79 |
| KRG96400 | Soybean | nucleus | 79.82 | 85.85 |
| KRH68219 | Soybean | nucleus | 79.82 | 85.85 |
| KRG96473 | Soybean | nucleus | 79.39 | 85.38 |
| VIT_07s0005g00840.t01 | Wine grape | cytosol, mitochondrion | 77.63 | 85.1 |
| Bra036285.1-P | Field mustard | cytosol | 74.12 | 84.92 |
| CDY52784 | Canola | cytosol | 74.12 | 84.92 |
| KRH69268 | Soybean | nucleus | 78.95 | 84.91 |
| KRH31847 | Soybean | nucleus | 78.95 | 84.91 |
| KRH31849 | Soybean | nucleus | 78.95 | 84.91 |
| CDY18029 | Canola | cytosol | 65.35 | 84.66 |
| KRH69269 | Soybean | nucleus | 78.51 | 84.43 |
| CDX90946 | Canola | cytosol | 72.37 | 84.18 |
| Bra000887.1-P | Field mustard | cytosol | 69.74 | 84.13 |
| Solyc06g009210.2.1 | Tomato | nucleus, plastid, unclear | 78.51 | 84.04 |
| CDY22039 | Canola | cytosol | 73.68 | 84.0 |
| Zm00001d015300_P002 | Maize | cytosol, mitochondrion | 80.26 | 83.18 |
| AT4G02230.1 | Thale cress | cytosol, mitochondrion | 75.0 | 82.21 |
| AT1G02780.1 | Thale cress | cytosol | 75.88 | 80.84 |
| PGSC0003DMT400046201 | Potato | mitochondrion | 75.44 | 80.37 |
| Solyc09g075430.2.1 | Tomato | nucleus, unclear | 76.75 | 80.28 |
| GSMUA_Achr1P26610_001 | Banana | cytosol | 67.11 | 80.1 |
| CDY65792 | Canola | cytosol | 75.44 | 80.0 |
| PGSC0003DMT400081324 | Potato | cytosol, mitochondrion | 77.19 | 80.0 |
| CDY32478 | Canola | cytosol | 75.88 | 79.72 |
| CDX89944 | Canola | cytosol | 75.88 | 79.36 |
| CDY37461 | Canola | cytosol | 75.44 | 79.26 |
| CDY15263 | Canola | cytosol | 75.44 | 79.26 |
| CDY15438 | Canola | cytosol | 75.0 | 79.17 |
| AT3G16780.1 | Thale cress | cytosol | 72.37 | 78.95 |
| Bra030509.1-P | Field mustard | cytosol | 75.44 | 78.9 |
| Bra032586.1-P | Field mustard | cytosol, mitochondrion | 69.74 | 78.71 |
| Bra033346.1-P | Field mustard | cytosol | 57.02 | 76.92 |
| GSMUA_Achr1P24740_001 | Banana | cytosol | 48.68 | 71.15 |
| VIT_17s0000g02150.t01 | Wine grape | cytosol | 53.07 | 66.12 |
| Solyc09g031760.1.1 | Tomato | cytosol | 34.21 | 65.0 |
| CDY01919 | Canola | endoplasmic reticulum | 55.26 | 64.95 |
| CDX92095 | Canola | cytosol, plastid | 44.74 | 63.35 |
| Bra022177.1-P | Field mustard | cytosol | 57.02 | 62.5 |
| CDY28336 | Canola | cytosol, plastid | 17.11 | 57.35 |
| AT4G16030.1 | Thale cress | cytosol, mitochondrion | 25.44 | 50.88 |
| KRH76216 | Soybean | cytosol, mitochondrion | 72.37 | 48.53 |
| CDX95905 | Canola | nucleus | 50.44 | 41.97 |
Protein Annotations
| Gene3D:1.10.1200.240 | Gene3D:1.10.1650.10 | MapMan:17.1.2.1.20 | InterPro:60S_ribosomal_L19/L19e_sf | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0022625 | InterPro:IPR015972 | PFAM:PF01280 | ScanProsite:PS00526 | PANTHER:PTHR10722 |
| PANTHER:PTHR10722:SF11 | InterPro:Ribosomal_L19/L19e | InterPro:Ribosomal_L19/L19e_CS | InterPro:Ribosomal_L19/L19e_dom1 | InterPro:Ribosomal_L19_euka | SMART:SM01416 |
| SUPFAM:SSF48140 | EnsemblPlantsGene:TraesCS4D01G170100 | EnsemblPlants:TraesCS4D01G170100.1 | TIGR:cd01417 | SEG:seg | : |
Description
No Description!
Coordinates
chr4D:-:295432929..295435027
Molecular Weight (calculated)
26389.7 Da
IEP (calculated)
11.753
GRAVY (calculated)
-0.939
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLKLQKRL ASSVLKCGKG KVWLDPNEVN EISMANSREN PIPFPYLLLS CPWLPCGQNI RKLVKDGFII RKPQKIHSRS RARRAHEAKQ KGRHSGCGKR
101: RGTREARLPT KILWMRRMRV LRRLLRKYRE AKKIDKHMYH DMYLKVKGNM FKNKRVLMES IHKSKAEKAR EKTLSDQFEA KRAKSKASRE RKIARREERL
201: AQGPRDHSAP AAAAAPAQPA ATPKKAKK
101: RGTREARLPT KILWMRRMRV LRRLLRKYRE AKKIDKHMYH DMYLKVKGNM FKNKRVLMES IHKSKAEKAR EKTLSDQFEA KRAKSKASRE RKIARREERL
201: AQGPRDHSAP AAAAAPAQPA ATPKKAKK
001: MVSLKLQKRL AASVMKCGKG KVWLDPNESS DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARKMKIAK MKGRHSGYGK RKGTREARLP TKVLWMRRMR
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK
Arabidopsis Description
RPL19A60S ribosomal protein L19-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.