Factsheet for Bra022177.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92095	Canola	cytosol, plastid	68.75	88.82
Bra036285.1-P	Field mustard	cytosol	67.79	70.85
Bra000887.1-P	Field mustard	cytosol	62.98	69.31
VIT_05s0077g01840.t01	Wine grape	cytosol	65.87	66.5
Bra033346.1-P	Field mustard	cytosol	53.85	66.27
KRH69269	Soybean	nucleus	67.31	66.04
KRH31849	Soybean	nucleus	66.83	65.57
VIT_07s0005g00840.t01	Wine grape	cytosol, mitochondrion	65.38	65.38
AT1G02780.1	Thale cress	cytosol	66.83	64.95
Bra030509.1-P	Field mustard	cytosol	67.79	64.68
KRH68219	Soybean	nucleus	65.87	64.62
KRH69268	Soybean	nucleus	65.87	64.62
KRH31847	Soybean	nucleus	65.87	64.62
KRG96473	Soybean	nucleus	65.87	64.62
KRH68137	Soybean	nucleus	65.38	64.15
KRG96400	Soybean	nucleus	65.38	64.15
Bra032586.1-P	Field mustard	cytosol, mitochondrion	62.02	63.86
EES06302	Sorghum	cytosol, mitochondrion	63.46	63.77
PGSC0003DMT400046201	Potato	mitochondrion	65.38	63.55
HORVU4Hr1G049670.2	Barley	cytosol	62.02	63.24
Os03t0337800-01	Rice	nucleus	62.98	62.98
EES03157	Sorghum	cytosol, mitochondrion	62.5	62.8
TraesCS2D01G109000.1	Wheat	golgi	62.98	62.68
TraesCS2A01G108900.1	Wheat	cytosol	62.98	62.68
Os03t0579300-00	Rice	nucleus	62.02	62.62
EER89359	Sorghum	cytosol, mitochondrion	62.5	62.5
HORVU2Hr1G018700.1	Barley	plasma membrane	62.5	62.2
TraesCS2A01G094200.1	Wheat	cytosol	62.5	61.61
PGSC0003DMT400081324	Potato	cytosol, mitochondrion	64.9	61.36
TraesCS2D01G092800.1	Wheat	nucleus	62.5	61.03
GSMUA_Achr1P26610_001	Banana	cytosol	55.29	60.21
TraesCS4D01G170100.1	Wheat	cytosol	62.5	57.02
Solyc09g031760.1.1	Tomato	cytosol	32.69	56.67
TraesCS4A01G137200.1	Wheat	cytosol	55.29	50.88
Zm00001d053864_P001	Maize	cytosol	54.33	49.56
KRH76216	Soybean	cytosol, mitochondrion	60.1	36.76
TraesCS2B01G419700.1	Wheat	plastid	29.33	35.06

Protein Annotations

Gene3D:1.10.1200.240	Gene3D:1.10.1650.10	MapMan:17.1.2.1.20	InterPro:60S_ribosomal_L19/L19e_sf	EnsemblPlantsGene:Bra022177	EnsemblPlants:Bra022177.1
EnsemblPlants:Bra022177.1-P	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	InterPro:IPR015972
UniProt:M4E080	PFAM:PF01280	PANTHER:PTHR10722	PANTHER:PTHR10722:SF11	InterPro:Ribosomal_L19/L19e	InterPro:Ribosomal_L19/L19e_dom1
InterPro:Ribosomal_L19_euka	SMART:SM01416	SUPFAM:SSF48140	UniParc:UPI000254772C	SEG:seg	:

Description

AT3G16780 (E=1e-044) | 60S ribosomal protein L19 (RPL19B)

Coordinates

chrA05:-:19285101..19290798

Molecular Weight (calculated)

24325.1 Da

IEP (calculated)

11.833

GRAVY (calculated)

-1.046

Length

208 amino acids

Sequence
(BLAST)

001: MSINAQKRLT ASVMNCGKEK LWLDPSESKD ISMANSNGKR RKKFPKKPIR DNHALRTLVK DGLIIRKLSK IHSRAHARTL NEAKRKGRHS GSGKRKGTRE
101: ARQPTKFLWM NRMRVLRRFL LNYREKNKID KHMYHEMYMK VKGGVFKNKR VLMESIHKYT VEKAREKTLS DQFETKRVKN KASRERKLAR REKRLARGAG
201: GGEIAVVS

Best Arabidopsis Sequence Match ( AT3G16780.1 )
(BLAST)

001: MVSLKIQKRL AASVMKCGKG KVWLDPNESG DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARALNEAK RKGRHSGYGK RKGTREARLP TKILWMRRMR
101: VLRRFLSKYR ESKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKMKAEKA REKTLADQFE AKRIKNKASR ERKFARREER LAQGPGGGET TTPAGAPQQP
201: EVTKKKSKK

Arabidopsis Description

RPL19B60S ribosomal protein L19-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.