Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g009210.2.1 | Tomato | nucleus, plastid, unclear | 77.5 | 43.66 |
| Solyc09g075430.2.1 | Tomato | nucleus, unclear | 77.5 | 42.66 |
| GSMUA_Achr1P26610_001 | Banana | cytosol | 66.67 | 41.88 |
| Bra000887.1-P | Field mustard | cytosol | 65.83 | 41.8 |
| CDX92095 | Canola | cytosol, plastid | 55.83 | 41.61 |
| CDX90946 | Canola | cytosol | 67.5 | 41.33 |
| KRG96473 | Soybean | nucleus | 72.5 | 41.04 |
| KRH69268 | Soybean | nucleus | 72.5 | 41.04 |
| VIT_07s0005g00840.t01 | Wine grape | cytosol, mitochondrion | 70.83 | 40.87 |
| KRH69269 | Soybean | nucleus | 71.67 | 40.57 |
| KRH31849 | Soybean | nucleus | 71.67 | 40.57 |
| KRH31847 | Soybean | nucleus | 71.67 | 40.57 |
| Bra036285.1-P | Field mustard | cytosol | 66.67 | 40.2 |
| CDY52784 | Canola | cytosol | 66.67 | 40.2 |
| CDY22039 | Canola | cytosol | 66.67 | 40.0 |
| VIT_05s0077g01840.t01 | Wine grape | cytosol | 68.33 | 39.81 |
| Bra033346.1-P | Field mustard | cytosol | 55.83 | 39.65 |
| KRH68219 | Soybean | nucleus | 70.0 | 39.62 |
| HORVU4Hr1G049670.2 | Barley | cytosol | 65.83 | 38.73 |
| KRG96400 | Soybean | nucleus | 68.33 | 38.68 |
| AT3G16780.1 | Thale cress | cytosol | 66.67 | 38.28 |
| EES03157 | Sorghum | cytosol, mitochondrion | 65.83 | 38.16 |
| EER89359 | Sorghum | cytosol, mitochondrion | 65.83 | 37.98 |
| Os03t0337800-01 | Rice | nucleus | 65.83 | 37.98 |
| AT4G02230.1 | Thale cress | cytosol, mitochondrion | 65.83 | 37.98 |
| KRH68137 | Soybean | nucleus | 66.67 | 37.74 |
| CDY18029 | Canola | cytosol | 55.0 | 37.5 |
| AT1G02780.1 | Thale cress | cytosol | 66.67 | 37.38 |
| EES06302 | Sorghum | cytosol, mitochondrion | 64.17 | 37.2 |
| CDY15438 | Canola | cytosol | 66.67 | 37.04 |
| Os03t0579300-00 | Rice | nucleus | 63.33 | 36.89 |
| CDY37461 | Canola | cytosol | 66.67 | 36.87 |
| CDY32478 | Canola | cytosol | 66.67 | 36.87 |
| HORVU2Hr1G018700.1 | Barley | plasma membrane | 64.17 | 36.84 |
| CDY65792 | Canola | cytosol | 65.83 | 36.74 |
| CDX89944 | Canola | cytosol | 66.67 | 36.7 |
| Bra030509.1-P | Field mustard | cytosol | 66.67 | 36.7 |
| CDY15263 | Canola | cytosol | 65.83 | 36.41 |
| TraesCS2A01G108900.1 | Wheat | cytosol | 63.33 | 36.36 |
| TraesCS2D01G109000.1 | Wheat | golgi | 63.33 | 36.36 |
| TraesCS2D01G092800.1 | Wheat | nucleus | 64.17 | 36.15 |
| TraesCS2A01G094200.1 | Wheat | cytosol | 63.33 | 36.02 |
| CDY01919 | Canola | endoplasmic reticulum | 55.83 | 34.54 |
| TraesCS4D01G170100.1 | Wheat | cytosol | 65.0 | 34.21 |
| Zm00001d053864_P001 | Maize | cytosol | 64.17 | 33.77 |
| Bra032586.1-P | Field mustard | cytosol, mitochondrion | 56.67 | 33.66 |
| Bra022177.1-P | Field mustard | cytosol | 56.67 | 32.69 |
| TraesCS4A01G137200.1 | Wheat | cytosol | 50.0 | 26.55 |
| TraesCS2B01G419700.1 | Wheat | plastid | 35.0 | 24.14 |
| CDX95905 | Canola | nucleus | 53.33 | 23.36 |
| KRH76216 | Soybean | cytosol, mitochondrion | 64.17 | 22.65 |
Protein Annotations
| Gene3D:1.10.1200.240 | MapMan:17.1.2.1.20 | InterPro:60S_ribosomal_L19/L19e_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 | UniProt:K4CSN2 | PFAM:PF01280 |
| PANTHER:PTHR10722 | PANTHER:PTHR10722:SF11 | InterPro:Ribosomal_L19/L19e | SMART:SM01416 | SUPFAM:SSF48140 | EnsemblPlantsGene:Solyc09g031760.1 |
| EnsemblPlants:Solyc09g031760.1.1 | UniParc:UPI000276C714 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr9:-:28021682..28022044
Molecular Weight (calculated)
14015.3 Da
IEP (calculated)
12.197
GRAVY (calculated)
-1.343
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEAKRKGRH SGHGKRKGTR EVRLPSKVLR MRRLRVLRRL HRKYSESKKI DKHMYPDMYM KVKGNVFKNK RVLMENNLRL GGQRTRQAGR EFARREERLA
101: QGPGGEKPVQ PAAPAQGSNK
101: QGPGGEKPVQ PAAPAQGSNK
001: MVSLKIQKRL AASVMKCGKG KVWLDPNESG DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARALNEAK RKGRHSGYGK RKGTREARLP TKILWMRRMR
101: VLRRFLSKYR ESKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKMKAEKA REKTLADQFE AKRIKNKASR ERKFARREER LAQGPGGGET TTPAGAPQQP
201: EVTKKKSKK
101: VLRRFLSKYR ESKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKMKAEKA REKTLADQFE AKRIKNKASR ERKFARREER LAQGPGGGET TTPAGAPQQP
201: EVTKKKSKK
Arabidopsis Description
RPL19B60S ribosomal protein L19-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.