Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22039 | Canola | cytosol | 87.38 | 93.5 |
| CDY52784 | Canola | cytosol | 86.45 | 92.96 |
| Bra036285.1-P | Field mustard | cytosol | 86.45 | 92.96 |
| CDY65792 | Canola | cytosol | 89.25 | 88.84 |
| CDX89944 | Canola | cytosol | 90.19 | 88.53 |
| CDY15263 | Canola | cytosol | 89.72 | 88.48 |
| Bra033346.1-P | Field mustard | cytosol | 69.63 | 88.17 |
| CDY32478 | Canola | cytosol | 89.25 | 88.02 |
| CDY15438 | Canola | cytosol | 88.78 | 87.96 |
| Bra030509.1-P | Field mustard | cytosol | 89.25 | 87.61 |
| CDY37461 | Canola | cytosol | 88.78 | 87.56 |
| AT4G02230.1 | Thale cress | cytosol, mitochondrion | 85.05 | 87.5 |
| Bra032586.1-P | Field mustard | cytosol, mitochondrion | 82.24 | 87.13 |
| KRG96473 | Soybean | nucleus | 85.51 | 86.32 |
| KRH31847 | Soybean | nucleus | 85.05 | 85.85 |
| VIT_05s0077g01840.t01 | Wine grape | cytosol | 82.24 | 85.44 |
| KRH69268 | Soybean | nucleus | 84.58 | 85.38 |
| KRH69269 | Soybean | nucleus | 84.58 | 85.38 |
| KRH68219 | Soybean | nucleus | 84.58 | 85.38 |
| VIT_07s0005g00840.t01 | Wine grape | cytosol, mitochondrion | 82.71 | 85.1 |
| KRH68137 | Soybean | nucleus | 84.11 | 84.91 |
| KRH31849 | Soybean | nucleus | 84.11 | 84.91 |
| AT3G16780.1 | Thale cress | cytosol | 82.71 | 84.69 |
| KRG96400 | Soybean | nucleus | 83.64 | 84.43 |
| Os03t0337800-01 | Rice | nucleus | 81.78 | 84.13 |
| PGSC0003DMT400046201 | Potato | mitochondrion | 83.64 | 83.64 |
| EES06302 | Sorghum | cytosol, mitochondrion | 80.84 | 83.57 |
| HORVU4Hr1G049670.2 | Barley | cytosol | 79.44 | 83.33 |
| EER89359 | Sorghum | cytosol, mitochondrion | 80.84 | 83.17 |
| HORVU2Hr1G018700.1 | Barley | plasma membrane | 80.84 | 82.78 |
| PGSC0003DMT400081324 | Potato | cytosol, mitochondrion | 85.05 | 82.73 |
| TraesCS2A01G108900.1 | Wheat | cytosol | 80.37 | 82.3 |
| TraesCS2D01G109000.1 | Wheat | golgi | 80.37 | 82.3 |
| TraesCS2D01G092800.1 | Wheat | nucleus | 81.78 | 82.16 |
| EES03157 | Sorghum | cytosol, mitochondrion | 79.44 | 82.13 |
| Os03t0579300-00 | Rice | nucleus | 78.97 | 82.04 |
| TraesCS2A01G094200.1 | Wheat | cytosol | 80.84 | 81.99 |
| TraesCS4D01G170100.1 | Wheat | cytosol | 80.84 | 75.88 |
| GSMUA_Achr1P26610_001 | Banana | cytosol | 66.82 | 74.87 |
| Bra022177.1-P | Field mustard | cytosol | 64.95 | 66.83 |
| Solyc09g031760.1.1 | Tomato | cytosol | 37.38 | 66.67 |
| CDX92095 | Canola | cytosol, plastid | 49.53 | 65.84 |
| TraesCS4A01G137200.1 | Wheat | cytosol | 65.89 | 62.39 |
| Zm00001d053864_P001 | Maize | cytosol | 65.42 | 61.4 |
| AT4G16030.1 | Thale cress | cytosol, mitochondrion | 28.5 | 53.51 |
| KRH76216 | Soybean | cytosol, mitochondrion | 76.17 | 47.94 |
| CDX95905 | Canola | nucleus | 58.88 | 45.99 |
| TraesCS2B01G419700.1 | Wheat | plastid | 32.71 | 40.23 |
Protein Annotations
| Gene3D:1.10.1200.240 | Gene3D:1.10.1650.10 | MapMan:17.1.2.1.20 | InterPro:60S_ribosomal_L19/L19e_sf | EntrezGene:839407 | ProteinID:AAF02889.1 |
| ProteinID:AEE27469.1 | EMBL:AF424580 | ArrayExpress:AT1G02780 | EnsemblPlantsGene:AT1G02780 | RefSeq:AT1G02780 | TAIR:AT1G02780 |
| RefSeq:AT1G02780-TAIR-G | EnsemblPlants:AT1G02780.1 | TAIR:AT1G02780.1 | Unigene:At.24204 | EMBL:BT010178 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0005886 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0022625 |
| GO:GO:0022626 | GO:GO:0030529 | GO:GO:0042788 | InterPro:IPR015972 | HAMAP:MF_01475 | RefSeq:NP_171777.1 |
| PFAM:PF01280 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00526 | PANTHER:PTHR10722 |
| PANTHER:PTHR10722:SF11 | UniProt:Q9SRX2 | InterPro:Ribosomal_L19/L19e | InterPro:Ribosomal_L19/L19e_CS | InterPro:Ribosomal_L19/L19e_dom1 | InterPro:Ribosomal_L19_euka |
| SMART:SM01416 | SUPFAM:SSF48140 | UniParc:UPI0000132F4D | EMBL:Z18373 | Symbol:emb2386 | SEG:seg |
Description
RPL19A60S ribosomal protein L19-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX2]
Coordinates
chr1:-:607799..609534
Molecular Weight (calculated)
24607.8 Da
IEP (calculated)
11.941
GRAVY (calculated)
-0.989
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLKLQKRL AASVMKCGKG KVWLDPNESS DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARKMKIAK MKGRHSGYGK RKGTREARLP TKVLWMRRMR
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.