Factsheet for TraesCS2B01G419700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
nucleus 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28336	Canola	cytosol, plastid	18.39	47.06
TraesCS2B01G126500.1	Wheat	unclear	47.13	39.81
TraesCS2B01G109000.1	Wheat	cytosol	47.13	38.86
GSMUA_Achr1P26610_001	Banana	cytosol	40.8	37.17
Bra000887.1-P	Field mustard	cytosol	40.23	37.04
VIT_07s0005g00840.t01	Wine grape	cytosol, mitochondrion	44.25	37.02
VIT_05s0077g01840.t01	Wine grape	cytosol	43.68	36.89
KRH31847	Soybean	nucleus	44.83	36.79
KRG96400	Soybean	nucleus	44.25	36.32
KRG96473	Soybean	nucleus	44.25	36.32
KRH31849	Soybean	nucleus	44.25	36.32
KRH68137	Soybean	nucleus	44.25	36.32
KRH68219	Soybean	nucleus	44.25	36.32
KRH69268	Soybean	nucleus	44.25	36.32
Bra036285.1-P	Field mustard	cytosol	41.38	36.18
KRH69269	Soybean	nucleus	43.68	35.85
Solyc06g009210.2.1	Tomato	nucleus, plastid, unclear	43.1	35.21
PGSC0003DMT400046201	Potato	mitochondrion	43.1	35.05
Solyc09g031760.1.1	Tomato	cytosol	24.14	35.0
AT3G16780.1	Thale cress	cytosol	41.38	34.45
Solyc09g075430.2.1	Tomato	nucleus, unclear	43.1	34.4
AT4G02230.1	Thale cress	cytosol, mitochondrion	40.8	34.13
PGSC0003DMT400081324	Potato	cytosol, mitochondrion	43.1	34.09
AT1G02780.1	Thale cress	cytosol	40.23	32.71
Bra030509.1-P	Field mustard	cytosol	40.8	32.57
Zm00001d053864_P001	Maize	cytosol	42.53	32.46
Bra032586.1-P	Field mustard	cytosol, mitochondrion	35.06	30.2
Bra022177.1-P	Field mustard	cytosol	35.06	29.33
Bra033346.1-P	Field mustard	cytosol	22.99	23.67
KRH76216	Soybean	cytosol, mitochondrion	41.38	21.18

Protein Annotations

Gene3D:1.10.1200.240	MapMan:35.1	InterPro:60S_ribosomal_L19/L19e_sf	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	PFAM:PF01280
PANTHER:PTHR10722	PANTHER:PTHR10722:SF11	InterPro:Ribosomal_L19/L19e	SMART:SM01416	SUPFAM:SSF48140	EnsemblPlantsGene:TraesCS2B01G419700
EnsemblPlants:TraesCS2B01G419700.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:601333200..601334441

Molecular Weight (calculated)

20134.0 Da

IEP (calculated)

11.351

GRAVY (calculated)

-0.629

Length

174 amino acids

Sequence
(BLAST)

001: MLLFVADPPC VRAASAYCAH MRRSCVRLDL YIAFIADLQV VVRPRRRHLH QTRGQGSSNP VEGRPGMSEP HKGQNIRKPV KDGLTIRKPQ KIHYRFHARR
101: AHEAKQKGHH SGYGKHMGTR EARLPTKIMS MKRMRILRPL LRKYREAKKI DTHMYHDMYL KVNVTCSITG GVCM

Best Arabidopsis Sequence Match ( AT3G16780.1 )
(BLAST)

001: MVSLKIQKRL AASVMKCGKG KVWLDPNESG DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARALNEAK RKGRHSGYGK RKGTREARLP TKILWMRRMR
101: VLRRFLSKYR ESKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKMKAEKA REKTLADQFE AKRIKNKASR ERKFARREER LAQGPGGGET TTPAGAPQQP
201: EVTKKKSKK

Arabidopsis Description

RPL19B60S ribosomal protein L19-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.