Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90946 | Canola | cytosol | 84.62 | 89.8 |
| CDY18029 | Canola | cytosol | 75.96 | 89.77 |
| Bra000887.1-P | Field mustard | cytosol | 81.25 | 89.42 |
| AT3G16780.1 | Thale cress | cytosol | 85.58 | 85.17 |
| AT1G02780.1 | Thale cress | cytosol | 87.5 | 85.05 |
| VIT_05s0077g01840.t01 | Wine grape | cytosol | 84.13 | 84.95 |
| VIT_07s0005g00840.t01 | Wine grape | cytosol, mitochondrion | 84.62 | 84.62 |
| KRH31849 | Soybean | nucleus | 85.58 | 83.96 |
| EES06302 | Sorghum | cytosol, mitochondrion | 83.17 | 83.57 |
| KRH68219 | Soybean | nucleus | 85.1 | 83.49 |
| KRH69269 | Soybean | nucleus | 85.1 | 83.49 |
| HORVU4Hr1G049670.2 | Barley | cytosol | 81.73 | 83.33 |
| KRG96473 | Soybean | nucleus | 84.62 | 83.02 |
| KRH31847 | Soybean | nucleus | 84.62 | 83.02 |
| Os03t0579300-00 | Rice | nucleus | 82.21 | 83.01 |
| TraesCS2D01G109000.1 | Wheat | golgi | 83.17 | 82.78 |
| TraesCS2A01G108900.1 | Wheat | cytosol | 83.17 | 82.78 |
| PGSC0003DMT400046201 | Potato | mitochondrion | 85.1 | 82.71 |
| Os03t0337800-01 | Rice | nucleus | 82.69 | 82.69 |
| KRH69268 | Soybean | nucleus | 84.13 | 82.55 |
| KRG96400 | Soybean | nucleus | 84.13 | 82.55 |
| KRH68137 | Soybean | nucleus | 84.13 | 82.55 |
| HORVU2Hr1G018700.1 | Barley | plasma membrane | 82.69 | 82.3 |
| EES03157 | Sorghum | cytosol, mitochondrion | 81.73 | 82.13 |
| TraesCS2A01G094200.1 | Wheat | cytosol | 82.69 | 81.52 |
| EER89359 | Sorghum | cytosol, mitochondrion | 81.25 | 81.25 |
| TraesCS2D01G092800.1 | Wheat | nucleus | 83.17 | 81.22 |
| PGSC0003DMT400081324 | Potato | cytosol, mitochondrion | 84.62 | 80.0 |
| GSMUA_Achr1P26610_001 | Banana | cytosol | 70.67 | 76.96 |
| TraesCS4D01G170100.1 | Wheat | cytosol | 82.21 | 75.0 |
| CDY01919 | Canola | endoplasmic reticulum | 65.38 | 70.1 |
| Solyc09g031760.1.1 | Tomato | cytosol | 37.98 | 65.83 |
| TraesCS4A01G137200.1 | Wheat | cytosol | 68.27 | 62.83 |
| Zm00001d053864_P001 | Maize | cytosol | 68.75 | 62.72 |
| AT4G16030.1 | Thale cress | cytosol, mitochondrion | 28.85 | 52.63 |
| KRH76216 | Soybean | cytosol, mitochondrion | 76.92 | 47.06 |
| TraesCS2B01G419700.1 | Wheat | plastid | 34.13 | 40.8 |
Protein Annotations
| Gene3D:1.10.1200.240 | Gene3D:1.10.1650.10 | MapMan:17.1.2.1.20 | InterPro:60S_ribosomal_L19/L19e_sf | EntrezGene:828099 | UniProt:A0A178UUL5 |
| ProteinID:AAC28170.1 | ProteinID:AEE82143.1 | EMBL:AF386993 | ArrayExpress:AT4G02230 | EnsemblPlantsGene:AT4G02230 | RefSeq:AT4G02230 |
| TAIR:AT4G02230 | RefSeq:AT4G02230-TAIR-G | EnsemblPlants:AT4G02230.1 | TAIR:AT4G02230.1 | EMBL:AY072494 | Unigene:At.23066 |
| ProteinID:CAB80716.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0005886 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0022625 | GO:GO:0022626 | GO:GO:0030529 |
| GO:GO:0042788 | InterPro:IPR015972 | HAMAP:MF_01475 | RefSeq:NP_192132.1 | ProteinID:OAO96542.1 | UniProt:P49693 |
| PFAM:PF01280 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00526 |
| PANTHER:PTHR10722 | PANTHER:PTHR10722:SF11 | InterPro:Ribosomal_L19/L19e | InterPro:Ribosomal_L19/L19e_CS | InterPro:Ribosomal_L19/L19e_dom1 | InterPro:Ribosomal_L19_euka |
| SMART:SM01416 | SUPFAM:SSF48140 | UniParc:UPI0000000FE9 | EMBL:Z17981 | SEG:seg | : |
Description
RPL19C60S ribosomal protein L19-3 [Source:UniProtKB/Swiss-Prot;Acc:P49693]
Coordinates
chr4:-:979158..980698
Molecular Weight (calculated)
24203.1 Da
IEP (calculated)
11.963
GRAVY (calculated)
-1.098
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLKLQKRL ASSVLKCGKR KVWLDPNEGS DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARQLNIAK RKGRHSGYGK RKGTREARLP TKVLWMRRMR
101: VLRRLLKKYR ETKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDIP AAAPPAQTAE
201: VPAKKSKK
101: VLRRLLKKYR ETKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDIP AAAPPAQTAE
201: VPAKKSKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.