Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G109000.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU2Hr1G018700.1 | Barley | plasma membrane | 98.1 | 99.04 |
| TraesCS2D01G092800.1 | Wheat | nucleus | 98.58 | 97.65 |
| TraesCS2A01G108900.1 | Wheat | cytosol | 94.31 | 95.22 |
| EER89359 | Sorghum | cytosol, mitochondrion | 91.47 | 92.79 |
| Os03t0579300-00 | Rice | nucleus | 90.05 | 92.23 |
| Zm00001d045069_P001 | Maize | plasma membrane, plastid | 90.52 | 91.83 |
| EES03157 | Sorghum | cytosol, mitochondrion | 90.05 | 91.79 |
| Zm00001d044287_P001 | Maize | plasma membrane, plastid | 89.57 | 91.3 |
| EES06302 | Sorghum | cytosol, mitochondrion | 89.1 | 90.82 |
| GSMUA_Achr7P03780_001 | Banana | cytosol, mitochondrion | 86.73 | 89.27 |
| GSMUA_Achr3P00710_001 | Banana | plasma membrane | 86.26 | 88.78 |
| GSMUA_Achr9P20320_001 | Banana | cytosol | 84.36 | 88.56 |
| VIT_05s0077g01840.t01 | Wine grape | cytosol | 85.78 | 87.86 |
| GSMUA_Achr8P33790_001 | Banana | cytosol, mitochondrion | 84.36 | 87.68 |
| KRH68219 | Soybean | nucleus | 86.73 | 86.32 |
| VIT_07s0005g00840.t01 | Wine grape | cytosol, mitochondrion | 84.83 | 86.06 |
| KRH68137 | Soybean | nucleus | 85.78 | 85.38 |
| KRG96473 | Soybean | nucleus | 85.78 | 85.38 |
| KRH31847 | Soybean | nucleus | 85.78 | 85.38 |
| CDY18029 | Canola | cytosol | 71.09 | 85.23 |
| CDY52784 | Canola | cytosol | 80.09 | 84.92 |
| Bra036285.1-P | Field mustard | cytosol | 80.09 | 84.92 |
| KRG96400 | Soybean | nucleus | 85.31 | 84.91 |
| KRH69268 | Soybean | nucleus | 85.31 | 84.91 |
| CDX90946 | Canola | cytosol | 78.67 | 84.69 |
| Bra000887.1-P | Field mustard | cytosol | 75.36 | 84.13 |
| Zm00001d015300_P002 | Maize | cytosol, mitochondrion | 87.68 | 84.09 |
| CDY22039 | Canola | cytosol | 79.62 | 84.0 |
| KRH31849 | Soybean | nucleus | 84.36 | 83.96 |
| KRH69269 | Soybean | nucleus | 84.36 | 83.96 |
| AT4G02230.1 | Thale cress | cytosol, mitochondrion | 81.52 | 82.69 |
| Solyc06g009210.2.1 | Tomato | nucleus, plastid, unclear | 82.94 | 82.16 |
| AT1G02780.1 | Thale cress | cytosol | 81.99 | 80.84 |
| Solyc09g075430.2.1 | Tomato | nucleus, unclear | 83.41 | 80.73 |
| CDY65792 | Canola | cytosol | 81.99 | 80.47 |
| PGSC0003DMT400046201 | Potato | mitochondrion | 81.52 | 80.37 |
| CDY32478 | Canola | cytosol | 82.46 | 80.18 |
| AT3G16780.1 | Thale cress | cytosol | 79.15 | 79.9 |
| CDY37461 | Canola | cytosol | 81.99 | 79.72 |
| CDY15438 | Canola | cytosol | 81.52 | 79.63 |
| GSMUA_Achr1P26610_001 | Banana | cytosol | 72.04 | 79.58 |
| Bra030509.1-P | Field mustard | cytosol | 81.99 | 79.36 |
| CDX89944 | Canola | cytosol | 81.99 | 79.36 |
| CDY15263 | Canola | cytosol | 81.52 | 79.26 |
| Bra032586.1-P | Field mustard | cytosol, mitochondrion | 75.83 | 79.21 |
| PGSC0003DMT400081324 | Potato | cytosol, mitochondrion | 81.99 | 78.64 |
| Bra033346.1-P | Field mustard | cytosol | 62.09 | 77.51 |
| GSMUA_Achr1P24740_001 | Banana | cytosol | 53.08 | 71.79 |
| TraesCS4A01G137200.1 | Wheat | cytosol | 74.41 | 69.47 |
| VIT_17s0000g02150.t01 | Wine grape | cytosol | 57.35 | 66.12 |
| CDY01919 | Canola | endoplasmic reticulum | 59.72 | 64.95 |
| CDX92095 | Canola | cytosol, plastid | 48.34 | 63.35 |
| Solyc09g031760.1.1 | Tomato | cytosol | 36.02 | 63.33 |
| Bra022177.1-P | Field mustard | cytosol | 61.61 | 62.5 |
| CDY28336 | Canola | cytosol, plastid | 18.96 | 58.82 |
| AT4G16030.1 | Thale cress | cytosol, mitochondrion | 28.44 | 52.63 |
| KRH76216 | Soybean | cytosol, mitochondrion | 78.2 | 48.53 |
| CDX95905 | Canola | nucleus | 54.5 | 41.97 |
Protein Annotations
| Gene3D:1.10.1200.240 | Gene3D:1.10.1650.10 | MapMan:17.1.2.1.20 | InterPro:60S_ribosomal_L19/L19e_sf | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0022625 | InterPro:IPR015972 | HAMAP:MF_01475 | PFAM:PF01280 | ScanProsite:PS00526 |
| PANTHER:PTHR10722 | PANTHER:PTHR10722:SF11 | InterPro:Ribosomal_L19/L19e | InterPro:Ribosomal_L19/L19e_CS | InterPro:Ribosomal_L19/L19e_dom1 | InterPro:Ribosomal_L19_euka |
| SMART:SM01416 | SUPFAM:SSF48140 | EnsemblPlantsGene:TraesCS2A01G094200 | EnsemblPlants:TraesCS2A01G094200.1 | TIGR:cd01417 | SEG:seg |
Description
No Description!
Coordinates
chr2A:-:47917807..47919634
Molecular Weight (calculated)
24454.3 Da
IEP (calculated)
12.006
GRAVY (calculated)
-1.090
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLKLQKRL ASSVLKCGKG KVWLDPNEVN EISMANSRQN IRKLVKDGFI IRKPQKIHSR SRARRAHEAK QKGRHSGYGK RRGTREARLP TKILWMRRMR
101: VLRRLLRKYR EAKKIDKHMY HDMYLKVKGN MFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKSKASR ERKHARREER LAQGPRDHAP APAAAAPAPA
201: AAAPKKAKAK K
101: VLRRLLRKYR EAKKIDKHMY HDMYLKVKGN MFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKSKASR ERKHARREER LAQGPRDHAP APAAAAPAPA
201: AAAPKKAKAK K
001: MVSLKIQKRL AASVMKCGKG KVWLDPNESG DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARALNEAK RKGRHSGYGK RKGTREARLP TKILWMRRMR
101: VLRRFLSKYR ESKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKMKAEKA REKTLADQFE AKRIKNKASR ERKFARREER LAQGPGGGET TTPAGAPQQP
201: EVTKKKSKK
101: VLRRFLSKYR ESKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKMKAEKA REKTLADQFE AKRIKNKASR ERKFARREER LAQGPGGGET TTPAGAPQQP
201: EVTKKKSKK
Arabidopsis Description
RPL19B60S ribosomal protein L19-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.