Factsheet for Zm00001d015300_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06302	Sorghum	cytosol, mitochondrion	90.45	96.14
Zm00001d044287_P001	Maize	plasma membrane, plastid	87.27	92.75
Os03t0337800-01	Rice	nucleus	85.91	90.87
Zm00001d045069_P001	Maize	plasma membrane, plastid	85.45	90.38
HORVU4Hr1G049670.2	Barley	cytosol	83.64	90.2
Os03t0579300-00	Rice	nucleus	84.09	89.81
HORVU2Hr1G018700.1	Barley	plasma membrane	85.0	89.47
TraesCS2B01G126500.1	Wheat	unclear	83.64	89.32
TraesCS2A01G108900.1	Wheat	cytosol	83.64	88.04
TraesCS2D01G109000.1	Wheat	golgi	83.64	88.04
TraesCS2A01G094200.1	Wheat	cytosol	84.09	87.68
TraesCS2B01G109000.1	Wheat	cytosol	84.09	87.68
TraesCS2D01G092800.1	Wheat	nucleus	84.55	87.32
TraesCS4D01G170100.1	Wheat	cytosol	83.18	80.26
Zm00001d053864_P001	Maize	cytosol	69.09	66.67

Protein Annotations

Gene3D:1.10.1200.240	Gene3D:1.10.1650.10	MapMan:17.1.2.1.20	EntrezGene:542284	InterPro:60S_ribosomal_L19/L19e_sf	UniProt:A0A1D6H153
ProteinID:AQK68620.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	GO:GO:0030529
InterPro:IPR015972	PFAM:PF01280	ScanProsite:PS00526	PANTHER:PTHR10722	PANTHER:PTHR10722:SF11	InterPro:Ribosomal_L19/L19e
InterPro:Ribosomal_L19/L19e_CS	InterPro:Ribosomal_L19/L19e_dom1	InterPro:Ribosomal_L19_euka	SMART:SM01416	SUPFAM:SSF48140	UniParc:UPI0008425D7F
EnsemblPlantsGene:Zm00001d015300	EnsemblPlants:Zm00001d015300_P002	EnsemblPlants:Zm00001d015300_T002	SEG:seg	:	:

Description

60S ribosomal protein L19

Coordinates

chr5:-:83323909..83326591

Molecular Weight (calculated)

25593.9 Da

IEP (calculated)

11.841

GRAVY (calculated)

-0.939

Length

220 amino acids

Sequence
(BLAST)

001: MVSLKLQKRL AASYLKCGKG KVWLDPNEVS EISMANSRQN IRKLVKDGFI IKKPHKIHSR SRARRAHDAK QKGRHSGYGM LLQLIYVTVL KGKRRGTREA
101: RLPTKVLWMR RMRVLRRLLR KYREAKKIDK HMYHDMYMKV KGNAFKNKRV LMESIHKSKA EKAREKTLSD QFEAKRAKSK ASRERKIARR EERLAQGPRE
201: ITPPVSSTAP ATGAPKKAKK

Best Arabidopsis Sequence Match ( AT1G02780.1 )
(BLAST)

001: MVSLKLQKRL AASVMKCGKG KVWLDPNESS DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARKMKIAK MKGRHSGYGK RKGTREARLP TKVLWMRRMR
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK

Arabidopsis Description

RPL19A60S ribosomal protein L19-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.