Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92095 | Canola | cytosol, plastid | 38.32 | 65.22 |
| CDY22039 | Canola | cytosol | 46.72 | 64.0 |
| CDY52784 | Canola | cytosol | 46.35 | 63.82 |
| CDX90946 | Canola | cytosol | 44.89 | 62.76 |
| CDY18029 | Canola | cytosol | 38.32 | 59.66 |
| AT1G02780.1 | Thale cress | cytosol | 45.99 | 58.88 |
| CDY15438 | Canola | cytosol | 46.35 | 58.8 |
| CDY65792 | Canola | cytosol | 45.99 | 58.6 |
| CDY32478 | Canola | cytosol | 46.35 | 58.53 |
| CDY37461 | Canola | cytosol | 46.35 | 58.53 |
| CDX89944 | Canola | cytosol | 46.35 | 58.26 |
| VIT_07s0005g00840.t01 | Wine grape | cytosol, mitochondrion | 44.16 | 58.17 |
| CDY15263 | Canola | cytosol | 45.99 | 58.06 |
| KRH69269 | Soybean | nucleus | 44.89 | 58.02 |
| VIT_05s0077g01840.t01 | Wine grape | cytosol | 43.43 | 57.77 |
| KRH31849 | Soybean | nucleus | 44.53 | 57.55 |
| PGSC0003DMT400046201 | Potato | mitochondrion | 44.53 | 57.01 |
| KRG96473 | Soybean | nucleus | 43.8 | 56.6 |
| KRH31847 | Soybean | nucleus | 43.8 | 56.6 |
| KRH68219 | Soybean | nucleus | 43.8 | 56.6 |
| KRH69268 | Soybean | nucleus | 43.8 | 56.6 |
| EES06302 | Sorghum | cytosol, mitochondrion | 42.7 | 56.52 |
| KRH68137 | Soybean | nucleus | 43.43 | 56.13 |
| HORVU4Hr1G049670.2 | Barley | cytosol | 41.61 | 55.88 |
| KRG96400 | Soybean | nucleus | 43.07 | 55.66 |
| TraesCS2A01G108900.1 | Wheat | cytosol | 42.34 | 55.5 |
| TraesCS2D01G109000.1 | Wheat | golgi | 42.34 | 55.5 |
| Os03t0579300-00 | Rice | nucleus | 41.61 | 55.34 |
| Os03t0337800-01 | Rice | nucleus | 41.97 | 55.29 |
| EES03157 | Sorghum | cytosol, mitochondrion | 41.61 | 55.07 |
| HORVU2Hr1G018700.1 | Barley | plasma membrane | 41.97 | 55.02 |
| PGSC0003DMT400081324 | Potato | cytosol, mitochondrion | 44.16 | 55.0 |
| TraesCS2A01G094200.1 | Wheat | cytosol | 41.97 | 54.5 |
| TraesCS2D01G092800.1 | Wheat | nucleus | 41.97 | 53.99 |
| EER89359 | Sorghum | cytosol, mitochondrion | 40.88 | 53.85 |
| Solyc09g031760.1.1 | Tomato | cytosol | 23.36 | 53.33 |
| TraesCS4D01G170100.1 | Wheat | cytosol | 41.97 | 50.44 |
| CDY01919 | Canola | endoplasmic reticulum | 32.85 | 46.39 |
| TraesCS4A01G137200.1 | Wheat | cytosol | 36.86 | 44.69 |
| CDY28336 | Canola | cytosol, plastid | 8.03 | 32.35 |
| KRH76216 | Soybean | cytosol, mitochondrion | 39.42 | 31.76 |
Protein Annotations
| Gene3D:1.10.1200.240 | Gene3D:1.10.1650.10 | MapMan:17.1.2.1.20 | InterPro:60S_ribosomal_L19/L19e_sf | GO:A0A078E272 | EnsemblPlants:CDX95905 |
| ProteinID:CDX95905 | ProteinID:CDX95905.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00101904001 | InterPro:IPR015972 |
| PFAM:PF01280 | ScanProsite:PS00526 | PANTHER:PTHR10722 | PANTHER:PTHR10722:SF11 | InterPro:Ribosomal_L19/L19e | InterPro:Ribosomal_L19/L19e_CS |
| InterPro:Ribosomal_L19/L19e_dom1 | SMART:SM01416 | SUPFAM:SSF48140 | UniParc:UPI0004EDC187 | SEG:seg | : |
Description
BnaC05g36560D
Coordinates
chrLK031891:-:1318135..1320913
Molecular Weight (calculated)
31505.6 Da
IEP (calculated)
11.090
GRAVY (calculated)
-0.635
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MVALVSTSKT RTKLTSEEDA AIIPEGCAAT AATPKECPVL NAQKRLAASV MKCGKGKVWL DPSESKDISM ANSRSLEKER SLKERVWAVR IEQGGSQDSS
101: PENTTRFRVF DLLRSIQWAV LSVLTEYFCM LMPPFAMQKF SRVFKDSRVW VFQRHSGYGK KKGTREVRQP TKVLWMNRLR VLRRFLLNYR EKNKIDKHMY
201: HDMYKKVKGG VFKNKRVLME SIHKSKVEQA REKTLSGQFE AKRVKNKARK ERKFARKKER LARGAGGGEI AVVS
101: PENTTRFRVF DLLRSIQWAV LSVLTEYFCM LMPPFAMQKF SRVFKDSRVW VFQRHSGYGK KKGTREVRQP TKVLWMNRLR VLRRFLLNYR EKNKIDKHMY
201: HDMYKKVKGG VFKNKRVLME SIHKSKVEQA REKTLSGQFE AKRVKNKARK ERKFARKKER LARGAGGGEI AVVS
001: MVSLKLQKRL AASVMKCGKG KVWLDPNESS DISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARKMKIAK MKGRHSGYGK RKGTREARLP TKVLWMRRMR
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK
101: VLRRLLKKYR ETKKIDKHMY HDMYMRVKGN VFKNKRVLME SIHKSKAEKA REKTLSDQFE AKRAKNKASR ERKHARREER LAKGPGGDVA PVAAPAPAAT
201: PAPTAAVPKK KSKK
Arabidopsis Description
RPL19A60S ribosomal protein L19-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.