Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
 nucleus: 21132161
endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH61982 Soybean endoplasmic reticulum 93.72 95.65
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 63.0 62.58
PGSC0003DMT400076024 Potato cytosol, nucleus 33.63 56.39
AT4G31340.1 Thale cress endoplasmic reticulum 54.48 55.61
Bra011260.1-P Field mustard endoplasmic reticulum 54.26 55.25
Zm00001d029841_P001 Maize cytosol 27.8 55.11
CDY28257 Canola endoplasmic reticulum 54.04 55.02
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 50.45 54.61
CDX68735 Canola endoplasmic reticulum 53.59 54.07
GSMUA_Achr10P... Banana endoplasmic reticulum 53.81 53.93
Solyc08g074290.2.1 Tomato nucleus 53.81 53.93
Solyc08g006030.2.1 Tomato unclear 53.36 53.72
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 52.91 53.64
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 52.24 53.56
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 51.57 53.49
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 51.35 53.26
Os08t0519400-01 Rice plasma membrane 53.36 52.65
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 52.24 52.48
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 48.88 51.78
PGSC0003DMT400038486 Potato endoplasmic reticulum 53.81 51.72
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 52.47 51.43
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 50.9 51.24
Os09t0497700-01 Rice plasma membrane 50.9 50.9
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 51.35 50.89
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 51.12 50.44
TraesCS7A01G253000.2 Wheat golgi 51.12 50.44
Zm00001d031532_P001 Maize plasma membrane 50.0 49.23
Zm00001d049764_P001 Maize plasma membrane 50.22 49.12
Zm00001d005407_P001 Maize extracellular 30.94 48.42
Zm00001d024398_P001 Maize cytosol 14.13 47.73
Solyc05g010750.2.1 Tomato cytosol 13.45 47.62
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 48.21 47.05
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 46.86 45.53
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 46.86 45.53
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 46.64 45.51
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 45.96 44.86
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 11.66 43.7
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 10.09 43.27
Zm00001d006052_P004 Maize endoplasmic reticulum 44.62 40.37
CDY67576 Canola extracellular 8.52 37.62
HORVU5Hr1G074800.2 Barley plastid 44.84 37.59
Bra024012.1-P Field mustard mitochondrion 51.35 36.47
CDY13424 Canola plasma membrane 51.35 35.5
Os04t0607150-00 Rice vacuole 25.11 30.68
TraesCS2D01G428600.1 Wheat golgi, vacuole 28.25 30.07
TraesCS2A01G430700.2 Wheat golgi, vacuole 28.48 29.81
TraesCS2B01G451900.1 Wheat golgi, vacuole 28.03 29.69
KXG27068 Sorghum plasma membrane 24.66 28.13
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 26.91 26.03
Protein Annotations
EMBL:ACUP02003425EnsemblPlants:KRH52641EnsemblPlantsGene:GLYMA_06G080100Gene3D:1.20.5.1230Gene3D:1.20.5.170GO:GO:0005575
GO:GO:0016020GO:GO:0016021ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF1ProteinID:KRH52641
ProteinID:KRH52641.1SEG:segSignalP:SignalP-noTMSUPFAM:SSF57997SUPFAM:SSF58113TMHMM:TMhelix
UniParc:UPI000233A739UniProt:I1K974MapMan:35.2:::
Description
hypothetical protein
Coordinates
chr6:+:6145004..6152890
Molecular Weight (calculated)
50805.1 Da
IEP (calculated)
9.965
GRAVY (calculated)
-0.613
Length
446 amino acids
Sequence
(BLAST)
001: MAPPKLFVFA LSVTLIFAIV GAEADISIEG STPEPDTSAI RIQLDQLNSK IQILESQISE KLEEVKKKDE IIAEKEKSIE DKSITIQSLQ NEIASLQKKG
101: SLDAEEQVGK AHARAGELQK QVDKLKRELE TQNKEKVNWE TRVPELEKKI HDLNSKLEDL QKINEEQKKK IQKTERALKV AEEEMVKAKF EATAIEKELR
201: ETHGAWLPPW LAVHYIHSKS FVDSHWNKHG KPALEMVTQK ALEKKAQAGK WAEPHVETIK TKWVPAVKEQ WSVVKTNAEP HVQLLTTKTV EVYEASKNAI
301: SPHLSKAKEF VDPYYQEARK FSKPYIDQIA IAAKPHVDKV QVVLKPYTKE VVRTYGKFLE SATTYHRQVQ ASVQETLKKH ELTRPLATKE LEWFAASALL
401: ALPIILVARV FSAVFCSKKV NKPARNGNNH HARRKHKRGH LDKHTT
Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)
001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
Arabidopsis Description
AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.