Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024012.1-P | Field mustard | mitochondrion | 97.21 | 99.84 |
| CDX72304 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 60.31 | 89.43 |
| CDY28257 | Canola | endoplasmic reticulum | 54.11 | 79.68 |
| AT4G31340.1 | Thale cress | endoplasmic reticulum | 53.8 | 79.41 |
| CDX68735 | Canola | endoplasmic reticulum | 53.95 | 78.73 |
| CDY46149 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 43.57 | 65.35 |
| CDY20313 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.41 | 65.12 |
| CDY34774 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 42.17 | 64.61 |
| KRH52641 | Soybean | endoplasmic reticulum | 35.5 | 51.35 |
| KRH61982 | Soybean | endoplasmic reticulum | 34.73 | 51.26 |
| PGSC0003DMT400076024 | Potato | cytosol, nucleus | 21.09 | 51.13 |
| VIT_04s0008g02720.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 34.88 | 50.11 |
| Solyc08g074290.2.1 | Tomato | nucleus | 33.02 | 47.87 |
| Solyc08g006030.2.1 | Tomato | unclear | 32.25 | 46.95 |
| HORVU7Hr1G052350.1 | Barley | cytosol, plasma membrane | 29.77 | 46.6 |
| Zm00001d029841_P001 | Maize | cytosol | 15.97 | 45.78 |
| CDY67576 | Canola | extracellular | 7.13 | 45.54 |
| Os09t0497700-01 | Rice | plasma membrane | 31.16 | 45.07 |
| PGSC0003DMT400038486 | Potato | endoplasmic reticulum | 32.25 | 44.83 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 30.85 | 44.72 |
| Os08t0519400-01 | Rice | plasma membrane | 30.39 | 43.36 |
| KXG25592 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 30.23 | 42.86 |
| Solyc05g010760.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 6.82 | 42.31 |
| TraesCS7B01G149500.2 | Wheat | endoplasmic reticulum | 29.61 | 42.26 |
| TraesCS7A01G253000.2 | Wheat | golgi | 29.46 | 42.04 |
| GSMUA_Achr6P01760_001 | Banana | endoplasmic reticulum | 28.84 | 41.89 |
| GSMUA_Achr9P13940_001 | Banana | endoplasmic reticulum | 28.53 | 41.53 |
| TraesCS5B01G275100.2 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 28.99 | 40.92 |
| TraesCS5A01G275800.2 | Wheat | endoplasmic reticulum | 28.68 | 40.48 |
| Solyc05g010750.2.1 | Tomato | cytosol | 7.91 | 40.48 |
| Zm00001d049764_P001 | Maize | plasma membrane | 28.53 | 40.35 |
| Zm00001d005407_P001 | Maize | extracellular | 17.83 | 40.35 |
| Zm00001d031532_P001 | Maize | plasma membrane | 28.06 | 39.96 |
| TraesCS5D01G283100.2 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 28.37 | 39.87 |
| OQU89720 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 27.91 | 39.22 |
| Zm00001d006052_P004 | Maize | endoplasmic reticulum | 26.98 | 35.29 |
| HORVU5Hr1G074800.2 | Barley | plastid | 28.84 | 34.96 |
| Zm00001d024398_P001 | Maize | cytosol | 7.13 | 34.85 |
| HORVU2Hr1G002290.5 | Barley | endoplasmic reticulum, extracellular | 6.36 | 34.45 |
| Os04t0607150-00 | Rice | vacuole | 17.67 | 31.23 |
| CDY12172 | Canola | cytosol | 4.81 | 31.0 |
| TraesCS2D01G428600.1 | Wheat | golgi, vacuole | 18.14 | 27.92 |
| CDY43554 | Canola | plasma membrane | 16.74 | 27.84 |
| TraesCS2B01G451900.1 | Wheat | golgi, vacuole | 18.14 | 27.79 |
| TraesCS2A01G430700.2 | Wheat | golgi, vacuole | 18.29 | 27.7 |
| CDX68621 | Canola | plasma membrane | 16.43 | 27.39 |
| KXG27068 | Sorghum | plasma membrane | 15.5 | 25.58 |
| HORVU2Hr1G100500.17 | Barley | endoplasmic reticulum, golgi, mitochondrion, nucleus | 17.83 | 24.95 |
| CDX92946 | Canola | cytosol | 6.98 | 16.3 |
| CDY24314 | Canola | mitochondrion | 4.5 | 15.1 |
Protein Annotations
| EnsemblPlants:CDY13424 | EnsemblPlantsGene:GSBRNA2T00077703001 | Gene3D:1.20.5.1230 | GO:A0A078FKD5 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF599 | ncoils:Coil | PANTHER:PTHR34360 | PANTHER:PTHR34360:SF1 | PFAM:PF04654 |
| ProteinID:CDY13424 | ProteinID:CDY13424.1 | SEG:seg | SUPFAM:SSF58113 | TMHMM:TMhelix | UniParc:UPI0004EDCEC2 |
| UniProt:A0A078FKD5 | MapMan:35.2 | : | : | : | : |
Description
BnaA03g51420DBnaA03g51420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKD5]
Coordinates
chrLK032035:+:209031..215885
Molecular Weight (calculated)
72990.3 Da
IEP (calculated)
8.334
GRAVY (calculated)
-0.173
Length
645 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWRECYLDV ILVPPGIMVY ATYHVYLWYK LRTQPLTTII GTNARARRFW VASIIKDNEK KNILAVQTLR NCIMGSTLMA TTSILLCAGL AAVISSTYAV
101: KKPLNDAVYG AHGEFMVALK YVTILTIFLF SFFSHSLSIR FINQVNILIN TPFPPEELDE EMMVTPEEYV AELLERGFVL NTVGNRLFYA ALPLMLWIFG
201: PVLVFLCSVM MPPSSWLCYF FLPLFSPPPL SSPEEPEIVD AAGSDGSSKI QLDQLNAKIL ALESQVDEKA REVKGKDDLV AEKEKLLKAK EDKIASLQTE
301: VSSLQGTSDS AKQLGKVQAR VVELEKQVEV LRNFLEQKNK EKTSTEALTK EAEKKLTELN SSLDELEKTN EEQMKKIGKL ERAIKIAEEE ILRTKHEASS
401: KTNELLEAHG SWLPPWLAVH WISIQAYTET HWEAHGKPAV DTVILKVTEA KTQAVKWAEP HVKNAKTKYI PAIKETVATH VEPHVRTLSI KAKEAYHASK
501: SAVSPHIVTV QEIVDPYYQE AKKFSKPYVD QVVTATKPHV DNVKVSMKPY TTKVIIVYTE FLESATTYHN QVQAHVEQRL KSHELTEAFA TNEFVWFAAS
601: ALLALPIFFA YRVLSSLFCT KTKKAVQHPH HHGRRKTKRS HHSDK
101: KKPLNDAVYG AHGEFMVALK YVTILTIFLF SFFSHSLSIR FINQVNILIN TPFPPEELDE EMMVTPEEYV AELLERGFVL NTVGNRLFYA ALPLMLWIFG
201: PVLVFLCSVM MPPSSWLCYF FLPLFSPPPL SSPEEPEIVD AAGSDGSSKI QLDQLNAKIL ALESQVDEKA REVKGKDDLV AEKEKLLKAK EDKIASLQTE
301: VSSLQGTSDS AKQLGKVQAR VVELEKQVEV LRNFLEQKNK EKTSTEALTK EAEKKLTELN SSLDELEKTN EEQMKKIGKL ERAIKIAEEE ILRTKHEASS
401: KTNELLEAHG SWLPPWLAVH WISIQAYTET HWEAHGKPAV DTVILKVTEA KTQAVKWAEP HVKNAKTKYI PAIKETVATH VEPHVRTLSI KAKEAYHASK
501: SAVSPHIVTV QEIVDPYYQE AKKFSKPYVD QVVTATKPHV DNVKVSMKPY TTKVIIVYTE FLESATTYHN QVQAHVEQRL KSHELTEAFA TNEFVWFAAS
601: ALLALPIFFA YRVLSSLFCT KTKKAVQHPH HHGRRKTKRS HHSDK
001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
Arabidopsis Description
AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.