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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 6
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67576 Canola extracellular 22.57 94.06
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 93.82 86.43
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 83.14 81.4
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 82.66 80.93
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 77.91 74.55
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 66.51 64.37
CDY28257 Canola endoplasmic reticulum 66.75 64.16
CDX68735 Canola endoplasmic reticulum 66.98 63.8
PGSC0003DMT400076024 Potato cytosol, nucleus 31.12 49.25
KRH52641 Soybean endoplasmic reticulum 51.78 48.88
KRH61982 Soybean endoplasmic reticulum 49.88 48.05
Solyc08g074290.2.1 Tomato nucleus 49.41 46.74
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 48.93 45.88
Solyc08g006030.2.1 Tomato unclear 46.79 44.47
Zm00001d029841_P001 Maize cytosol 23.04 43.11
Os09t0497700-01 Rice plasma membrane 45.61 43.05
PGSC0003DMT400038486 Potato endoplasmic reticulum 47.27 42.89
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 41.57 42.48
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 10.45 42.31
CDY13424 Canola plasma membrane 64.61 42.17
GSMUA_Achr10P... Banana endoplasmic reticulum 44.18 41.8
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 43.94 41.67
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 44.42 41.1
Os08t0519400-01 Rice plasma membrane 43.71 40.71
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 42.04 39.95
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 42.52 39.6
Zm00001d024398_P001 Maize cytosol 12.35 39.39
TraesCS7A01G253000.2 Wheat golgi 42.04 39.16
Zm00001d049764_P001 Maize plasma membrane 42.04 38.82
Zm00001d031532_P001 Maize plasma membrane 41.57 38.63
Zm00001d005407_P001 Maize extracellular 25.65 37.89
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 41.09 37.69
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.62 37.42
Solyc05g010750.2.1 Tomato cytosol 11.16 37.3
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.62 37.25
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 40.14 36.98
Zm00001d006052_P004 Maize endoplasmic reticulum 39.67 33.87
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 9.5 33.61
HORVU5Hr1G074800.2 Barley plastid 40.14 31.77
Os04t0607150-00 Rice vacuole 27.08 31.23
CDY43554 Canola plasma membrane 26.84 29.12
TraesCS2D01G428600.1 Wheat golgi, vacuole 28.98 29.12
TraesCS2B01G451900.1 Wheat golgi, vacuole 28.98 28.98
CDX68621 Canola plasma membrane 26.37 28.68
TraesCS2A01G430700.2 Wheat golgi, vacuole 28.74 28.4
KXG27068 Sorghum plasma membrane 25.18 27.11
CDY12172 Canola cytosol 6.41 27.0
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 28.5 26.03
CDX92946 Canola cytosol 10.69 16.3
CDY24314 Canola mitochondrion 5.7 12.5
Protein Annotations
EnsemblPlants:CDY34774EnsemblPlantsGene:GSBRNA2T00057318001Gene3D:1.20.5.1230GO:A0A078HBA1GO:GO:0005575GO:GO:0016020
GO:GO:0016021ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF1ProteinID:CDY34774ProteinID:CDY34774.1
SEG:segSignalP:SignalP-noTMSUPFAM:SSF58113TMHMM:TMhelixUniParc:UPI0004EE8147UniProt:A0A078HBA1
MapMan:35.2:::::
Description
BnaA09g41410DBnaA09g41410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBA1]
Coordinates
chrLK032341:-:198318..200964
Molecular Weight (calculated)
48757.4 Da
IEP (calculated)
10.100
GRAVY (calculated)
-0.753
Length
421 amino acids
Sequence
(BLAST)
001: MAVAKVVALL LLFALVLTTR VFSDEEPTTT PGSASDIQLE QLHAKIHTLE SQVEEKRREV KEREETVTEK EKLLKERQDK VSSLETELSS LREKGSSESM
101: QLLEKAQARA TELEKQVEVL KNFLEQKNKE KESTEARSNE AEKKLNELNS RLDKLHKTKE EQKNKIRKLE RALKISEEEM LRMRHEAATK ARELQEVHAS
201: WLPHWLAVHW VHFQTVAGPH WDAHGKPVLE KVTQKVTQAK TQAERWAEPH MVNVKTKYIP AMKETVKTHV EPHVQTLSTK AKEAYHASKS AVTPHIVQFQ
301: AHVDPYYQEA KKFSKPYVDQ VATATKPHAD KAIHYYKEFL KSATTYHDQV QANVERKLKS HELTAPFATK EFIWFAASAL LALPIFIVYR FLCSLFRQTK
401: KPTRHSHQHG RRKAKRAHFD K
Best Arabidopsis Sequence Match ( AT2G24420.2 )
(BLAST)
001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK
Arabidopsis Description
AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.