CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024398_P001	Maize	cytosol	23.75	82.58
Zm00001d006052_P004	Maize	endoplasmic reticulum	78.87	73.43
Os09t0497700-01	Rice	plasma membrane	66.67	68.61
TraesCS5B01G275100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	65.14	65.43
TraesCS5A01G275800.2	Wheat	endoplasmic reticulum	65.14	65.43
TraesCS5D01G283100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	64.05	64.05
KXG25592	Sorghum	endoplasmic reticulum, golgi, plasma membrane	62.31	62.86
HORVU5Hr1G074800.2	Barley	plastid	63.4	54.7
PGSC0003DMT400076024	Potato	cytosol, nucleus	30.07	51.88
GSMUA_Achr10P...	Banana	endoplasmic reticulum	49.89	51.46
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	47.71	49.32
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	46.84	48.53
KRH52641	Soybean	endoplasmic reticulum	45.53	46.86
KRH61982	Soybean	endoplasmic reticulum	44.44	46.68
VIT_04s0008g02720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	45.53	46.55
Solyc08g074290.2.1	Tomato	nucleus	44.01	45.39
AT4G31340.1	Thale cress	endoplasmic reticulum	42.05	44.16
Solyc08g006030.2.1	Tomato	unclear	42.27	43.79
CDY20313	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.74	43.49
CDY28257	Canola	endoplasmic reticulum	41.39	43.38
CDY46149	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.52	43.26
CDX68735	Canola	endoplasmic reticulum	41.18	42.76
AT2G24420.1	Thale cress	endoplasmic reticulum, vacuole	40.96	42.73
Bra011260.1-P	Field mustard	endoplasmic reticulum	40.74	42.69
Solyc07g008970.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	40.09	42.2
PGSC0003DMT400038486	Potato	endoplasmic reticulum	42.48	42.03
Solyc05g010750.2.1	Tomato	cytosol	11.33	41.27
CDX72304	Canola	endoplasmic reticulum, plasma membrane, vacuole	39.0	41.15
Bra032096.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	40.3	41.11
CDY34774	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.69	41.09
PGSC0003DMT400073989	Potato	extracellular, plasma membrane, vacuole	39.0	40.41
Bra007856.1-P	Field mustard	endoplasmic reticulum, vacuole	36.38	36.54
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	8.28	36.54
CDY12172	Canola	cytosol	7.63	35.0
CDX68621	Canola	plasma membrane	26.14	31.01
Bra011163.1-P	Field mustard	plasma membrane	24.62	30.79
CDY43554	Canola	plasma membrane	25.93	30.67
AT4G30090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	25.71	30.41
Bra024012.1-P	Field mustard	mitochondrion	39.22	28.66
CDY13424	Canola	plasma membrane	39.22	27.91
KXG27068	Sorghum	plasma membrane	23.31	27.37
CDY67576	Canola	extracellular	5.23	23.76
Bra001871.1-P	Field mustard	cytosol	11.98	20.0
CDX92946	Canola	cytosol	11.98	19.93
CDY24314	Canola	mitochondrion	4.58	10.94

Protein Annotations

EnsemblPlants:OQU89720	EnsemblPlantsGene:SORBI_3002G252900	Gene3D:1.20.120.20	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
ncoils:Coil	PANTHER:PTHR34360	PANTHER:PTHR34360:SF4	ProteinID:OQU89720	ProteinID:OQU89720.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF58113	TMHMM:TMhelix	UniParc:UPI00022070C9	UniProt:A0A1W0W5R8	MapMan:35.2

Description

hypothetical protein

Coordinates

chr2:+:63927263..63932803

Molecular Weight (calculated)

51708.6 Da

IEP (calculated)

10.298

GRAVY (calculated)

-0.508

Length

459 amino acids

Sequence
(BLAST)

001: MRIARRLFVA APALLMGLLL LVAGPVAAQD AAVEGVAPAA DEIAANARAK EAAVLAAELG QLRAKISALE SRIAEQNLEL KTKNDAIETL DMIVKEKSQK
101: IATTQNEVTS LQAKGSLAAE EQASKANARA IELEKQIEKL KKDITEQKIK KAALEARAGD ADKKVQELNM KLEKLQRTSS DQKCRIQKTE HALKVAEEEL
201: MKVQLEATRK AKQLGEVHGA WLPPWLATHA AHTMEVMSNY WNEHGKPAFD SFLQKASEKS AQAKKWAEPH LETAKTKWMP VAKEKLVNLK KNAKPYVQMV
301: SEKSLEVYQT SSDFIRPHLV NAHQVADPYF QEAKKLSKPY IDQIATATKP HVKKIRTTLK PYTKRARHVY GQFLETATTY HQQAQATISD YLHQHEFTKQ
401: FVTEELVWYL ASALLVMPVF ILYTLLIEIF GIKKQKKKTS RSSNANHGHR RHKRRHAEK

Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)

001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK

Arabidopsis Description

AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.