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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:golgi, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
TargetP:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 78.57 91.07
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 74.06 86.21
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 73.87 86.0
Os09t0497700-01 Rice plasma membrane 55.45 66.14
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 54.7 63.4
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 47.37 61.16
Zm00001d024398_P001 Maize cytosol 14.66 59.09
Zm00001d006052_P004 Maize endoplasmic reticulum 50.56 54.56
GSMUA_Achr10P... Banana endoplasmic reticulum 41.54 49.66
PGSC0003DMT400076024 Potato cytosol, nucleus 24.81 49.62
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 10.53 47.06
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 39.1 46.85
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 38.16 45.82
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 38.16 45.21
KRH52641 Soybean endoplasmic reticulum 37.59 44.84
AT4G31340.1 Thale cress endoplasmic reticulum 36.65 44.62
Solyc05g010750.2.1 Tomato cytosol 10.53 44.44
KRH61982 Soybean endoplasmic reticulum 36.09 43.94
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 35.34 42.73
Solyc08g074290.2.1 Tomato nucleus 35.53 42.47
CDY28257 Canola endoplasmic reticulum 34.96 42.47
CDX68735 Canola endoplasmic reticulum 34.96 42.08
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 34.4 42.07
Bra011260.1-P Field mustard endoplasmic reticulum 34.4 41.78
Solyc08g006030.2.1 Tomato unclear 34.59 41.53
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 33.46 41.4
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 32.89 40.7
PGSC0003DMT400038486 Potato endoplasmic reticulum 35.15 40.3
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 31.77 40.14
Solyc07g008970.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 32.33 39.45
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 33.27 39.33
PGSC0003DMT400073989 Potato extracellular, plasma membrane, vacuole 32.71 39.28
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 31.39 36.54
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 6.2 31.73
Bra011163.1-P Field mustard plasma membrane 21.62 31.34
CDY43554 Canola plasma membrane 22.37 30.67
CDX68621 Canola plasma membrane 21.99 30.23
CDY12172 Canola cytosol 5.64 30.0
Bra024012.1-P Field mustard mitochondrion 34.96 29.62
AT4G30090.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 21.43 29.38
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 25.19 29.07
CDY13424 Canola plasma membrane 34.96 28.84
CDY67576 Canola extracellular 4.7 24.75
Bra001871.1-P Field mustard cytosol 9.96 19.27
CDX92946 Canola cytosol 9.96 19.2
CDY24314 Canola mitochondrion 3.01 8.33
Protein Annotations
EnsemblPlants:HORVU5Hr1G074800.2EnsemblPlantsGene:HORVU5Hr1G074800Gene3D:1.20.120.20GO:GO:0005575GO:GO:0016020GO:GO:0016021
ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF4SEG:segSUPFAM:SSF58113TMHMM:TMhelix
UniParc:UPI000B475A14UniProt:A0A287RTP3MapMan:35.2:::
Description
No Description!
Coordinates
chrchr5H:+:544952321..544958311
Molecular Weight (calculated)
58055.7 Da
IEP (calculated)
9.833
GRAVY (calculated)
-0.435
Length
532 amino acids
Sequence
(BLAST)
001: DARGACRAPL PPPLPSLPRH GTARHGSQPD GSNSVEKRSG LAASQERGHE ASTPITLLPS SSAPWPVHFT ISTCEMRIPG LLAAAAALLV LLLAVAGAAA
101: QEAAAAGDVR PEEIAAKATA KEEAVLAAEL GQLRAKVAAL ESSIAAQTQE LNSKDGGIET LEKVTGEMSQ NIATLQDEIT SLQSKGSIAA KELAGKASAR
201: AIELEKQIEK LKKDIEAQNN KKATMEAIAT DAEKRVQELS AKLDRLQKTS GEQKVRIQKT KNALKTAEEE LMKVQLEATA KSEQLGEVHG AWLPPWLAAH
301: AAHYMELISS HWSEHGKPAV NNLLQKTSEK TVQAKEWAEP HIETAKAKWI PVIKQNWATA KKNAEPYMQM VSAKSVELYQ VSKDAISPHV VKAHELADPY
401: FQEAKKLSKP YIDQVAKASK PHVDKLKTTL KPYTTKAGQE YEKLLETATL YHQQAQATIL DYMHQHEFLK QFANGELVWF LAAAWLLMPV YVLYILLAEV
501: FXXSRKKKIP RSGKGKVSVN GHRRHKRRHA DK
Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)
001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
Arabidopsis Description
AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.