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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
 golgi: 25047511
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 25047511 doi
Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han
Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d024398_P001 Maize cytosol 20.63 69.7
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 68.61 66.67
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 68.16 66.52
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 68.39 66.45
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 67.71 66.08
Os08t0519400-01 Rice plasma membrane 66.37 65.49
Zm00001d006052_P004 Maize endoplasmic reticulum 62.78 56.8
HORVU5Hr1G074800.2 Barley plastid 66.14 55.45
GSMUA_Achr10P... Banana endoplasmic reticulum 54.93 55.06
PGSC0003DMT400076024 Potato cytosol, nucleus 31.39 52.63
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 52.02 52.25
KRH52641 Soybean endoplasmic reticulum 50.9 50.9
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 51.12 50.78
KRH61982 Soybean endoplasmic reticulum 49.1 50.11
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 49.78 50.11
Solyc08g074290.2.1 Tomato nucleus 48.65 48.76
AT4G31340.1 Thale cress endoplasmic reticulum 47.31 48.28
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 47.31 47.95
CDX68735 Canola endoplasmic reticulum 46.86 47.29
CDY28257 Canola endoplasmic reticulum 46.41 47.26
Bra011260.1-P Field mustard endoplasmic reticulum 46.19 47.03
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 44.62 46.28
Solyc08g006030.2.1 Tomato unclear 45.96 46.28
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 44.84 45.98
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 43.05 45.61
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 43.95 45.58
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 45.52 45.11
Solyc05g010750.2.1 Tomato cytosol 12.56 44.44
PGSC0003DMT400038486 Potato endoplasmic reticulum 46.19 44.4
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 42.38 41.36
Solyc07g008970.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 40.36 41.28
PGSC0003DMT400073989 Potato extracellular, plasma membrane, vacuole 40.13 40.41
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 8.74 37.5
CDY12172 Canola cytosol 7.4 33.0
Bra011163.1-P Field mustard plasma membrane 26.68 32.43
Bra024012.1-P Field mustard mitochondrion 45.07 32.01
CDY43554 Canola plasma membrane 27.8 31.96
AT4G30090.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 27.8 31.96
CDX68621 Canola plasma membrane 27.58 31.78
CDY67576 Canola extracellular 7.17 31.68
CDY13424 Canola plasma membrane 45.07 31.16
Os04t0607150-00 Rice vacuole 23.99 29.32
Bra001871.1-P Field mustard cytosol 13.0 21.09
CDX92946 Canola cytosol 13.0 21.01
CDY24314 Canola mitochondrion 4.93 11.46
Protein Annotations
EnsemblPlants:Os09t0497700-01EnsemblPlantsGene:Os09g0497700EntrezGene:4347464Gene3D:1.20.5.340GO:GO:0005575GO:GO:0016020
GO:GO:0016021ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF4ProteinID:BAF25476.1ProteinID:BAT08787.1
ProteinID:EEE69983.1RefSeq:XP_015612623.1SEG:segSignalP:SignalP-noTMSUPFAM:SSF58113TMHMM:TMhelix
UniParc:UPI0000DD97C5UniProt:Q0J0J2MapMan:35.2:::
Description
AUTOPHAGY ASSOCIATED GENE 16Autophagy protein 16 domain containing protein. (Os09t0497700-01)
Coordinates
chr9:+:19244923..19250283
Molecular Weight (calculated)
50407.9 Da
IEP (calculated)
10.201
GRAVY (calculated)
-0.584
Length
446 amino acids
Sequence
(BLAST)
001: MRIARLLLLL ALVAGAAVAQ DAGLGDVAAE ETTAARAKEE AALAAELGQL RAKISALESS ITKQTQELKS KDDGIQKLEK LIEEKSKKIA TLQSEITSLE
101: TKRSLAAEEQ AGKANARAIE LEKQIEKLKK DIEAQNSKKS TVEARAGDAD KKVQELNAKL EKLQKTSDEQ KRRIQKTEHA LKVAEEELMR VQLETTTQLN
201: QLKEVHGAWL PPWLVTHTAR AKEMMLSHWN EHGKPAVNSL LQKASEKSVQ AKKWAEPHVE AAKTKWIPVI KEKWVTMKTN AEPYVQKVSA KSIELYQASK
301: DVVLPHVVKA HKIADPYFQE AKKVSKPYID QVAKATKPHV EKIRIYLKPY TKRAVHIYGN FLEKATAYHQ QAQATVLDYL HQHELTKEFA TEELAWYLAS
401: ALLIMPIYVF YNVLVETFCS KKKKKATRNV NANHGHRKHK RRHADK
Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)
001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
Arabidopsis Description
AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.