Factsheet for TraesCS5A01G275800.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G275100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	97.81	97.81
TraesCS5D01G283100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	91.68	91.29
HORVU5Hr1G074800.2	Barley	plastid	86.0	73.87
Os09t0497700-01	Rice	plasma membrane	66.08	67.71
OQU89720	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	65.43	65.14
Zm00001d024398_P001	Maize	cytosol	18.6	64.39
TraesCS7A01G253000.2	Wheat	golgi	57.99	58.63
Zm00001d006052_P004	Maize	endoplasmic reticulum	58.42	54.16
GSMUA_Achr10P...	Banana	endoplasmic reticulum	48.8	50.11
PGSC0003DMT400076024	Potato	cytosol, nucleus	28.67	49.25
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	46.17	47.52
VIT_04s0008g02720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	45.95	46.77
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	45.3	46.73
KRH52641	Soybean	endoplasmic reticulum	44.86	45.96
AT4G31340.1	Thale cress	endoplasmic reticulum	43.54	45.54
KRH61982	Soybean	endoplasmic reticulum	42.89	44.85
Solyc05g010750.2.1	Tomato	cytosol	12.25	44.44
CDY28257	Canola	endoplasmic reticulum	41.58	43.38
AT2G24420.1	Thale cress	endoplasmic reticulum, vacuole	41.58	43.18
Solyc08g074290.2.1	Tomato	nucleus	41.79	42.92
CDX68735	Canola	endoplasmic reticulum	41.36	42.76
Bra011260.1-P	Field mustard	endoplasmic reticulum	40.92	42.69
CDX72304	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.48	42.53
Solyc08g006030.2.1	Tomato	unclear	40.92	42.21
CDY46149	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.61	42.09
CDY20313	Canola	endoplasmic reticulum, plasma membrane, vacuole	38.73	41.16
Bra032096.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	40.48	41.11
PGSC0003DMT400038486	Potato	endoplasmic reticulum	41.58	40.95
CDY34774	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.98	40.14
Solyc07g008970.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	37.64	39.45
PGSC0003DMT400073989	Potato	extracellular, plasma membrane, vacuole	38.07	39.28
Bra007856.1-P	Field mustard	endoplasmic reticulum, vacuole	37.2	37.2
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	7.44	32.69
TraesCS2A01G430700.2	Wheat	golgi, vacuole	30.2	32.39
Bra011163.1-P	Field mustard	plasma membrane	25.6	31.88
CDY43554	Canola	plasma membrane	26.91	31.7
CDX68621	Canola	plasma membrane	26.26	31.01
CDY12172	Canola	cytosol	6.78	31.0
AT4G30090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	25.16	29.64
Bra024012.1-P	Field mustard	mitochondrion	40.48	29.46
CDY13424	Canola	plasma membrane	40.48	28.68
CDY67576	Canola	extracellular	5.03	22.77
Bra001871.1-P	Field mustard	cytosol	11.82	19.64
CDX92946	Canola	cytosol	11.82	19.57
CDY24314	Canola	mitochondrion	3.5	8.33

Protein Annotations

EnsemblPlants:TraesCS5A01G275800.2	EnsemblPlantsGene:TraesCS5A01G275800	Gene3D:1.20.120.20	ncoils:Coil	PANTHER:PTHR34360	PANTHER:PTHR34360:SF4
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF58113	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chr5A:+:485196752..485202751

Molecular Weight (calculated)

50640.2 Da

IEP (calculated)

9.636

GRAVY (calculated)

-0.412

Length

457 amino acids

Sequence
(BLAST)

001: MRIPGLLAAA AALLVLLLAV AGAAAQEAAA AGDVRPEEIA AKARAQEEAV LAAELGQLRA KVAALESSIA AQTLELNSKD GGIETLEKVT GEMSQNIATL
101: QNEITSLQSK GSIAAKEQAG KVNARAIELE KQIEKLKKDI EAQNNKKATM EARATDAEKK VQELNAKLDR LQKTSGEQKV RIQKTKNALK AAEEELMKVQ
201: LEATAKSEQL GEVHGAWLPP WLAAHAAHYM ELMSSHWSEH GKPAVNNLLQ KASEKTVQAK EWAEPHIETA KAKWIPVIKE NWATAKEIAE PYVQMVSAKS
301: VELYQASKDA ISPHVVKAHE LADPYFQEAK KLSKPYIDQV AKASKPHVDK LKTTLKPYTE KAGQEYEKLR DTATLYHQQA QVTILDYMHQ HELLKQFVNG
401: ELVWFLAAAW LLMPVYVLYI LLTEVCCITK KKKIPRSDKG KVLVNGHRRH KRRHADK

Best Arabidopsis Sequence Match ( AT4G30090.1 )
(BLAST)

001: MAFFKLLLFL FLVTLQIASF TGNGEASSSS SENNGCNGDQ NHLLNELKST VSALQSIIKE KNQELLSKEE KIRGLELYIR EKPYLFESEI DFSQFENPVK
101: HASEVEEKVY ELQKQVFGLK REVETQRKRR LEVEAELADK KVAQLSSKLE NIDGWFLSKL GLNPTESQAY LMTLWHQHLS PTLHTTLQMV SMKIEQVQKW
201: SEPHIETLNS QWIPSIKDAC VTITIYLEPK VQYITDKSIE LLYTSKQALT PHLIQGFDAS YYYLEVIRTH THPYTTRIMT LTKPHLERVQ VALEPYTENV
301: RHGFQKLVNS TKIYHQQAQE MLKNNEITKP VATMDLAWVG ATALIGFPLI FIIKLLSAVS NPKGKKRHNH KKEPTTGYRR AKRRHPHQ

Arabidopsis Description

Golgin family A protein [Source:UniProtKB/TrEMBL;Acc:F4JPI4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.