Factsheet for Solyc07g008970.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073989	Potato	extracellular, plasma membrane, vacuole	87.84	86.46
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	43.58	42.79
HORVU7Hr1G052350.1	Barley	cytosol, plasma membrane	40.37	42.72
Zm00001d024398_P001	Maize	cytosol	12.84	42.42
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	42.43	41.76
GSMUA_Achr10P...	Banana	endoplasmic reticulum	42.2	41.35
Os08t0519400-01	Rice	plasma membrane	42.66	41.15
Os09t0497700-01	Rice	plasma membrane	41.28	40.36
OQU89720	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	42.2	40.09
Solyc08g006030.2.1	Tomato	unclear	40.37	39.73
KXG25592	Sorghum	endoplasmic reticulum, golgi, plasma membrane	41.28	39.56
TraesCS7A01G253000.2	Wheat	golgi	40.83	39.38
TraesCS7B01G149500.2	Wheat	endoplasmic reticulum	40.83	39.38
Solyc08g074290.2.1	Tomato	nucleus	39.45	38.65
TraesCS5D01G283100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	40.37	38.34
Zm00001d029841_P001	Maize	cytosol	19.72	38.22
Zm00001d049764_P001	Maize	plasma membrane	39.91	38.16
TraesCS5B01G275100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	39.91	38.07
TraesCS5A01G275800.2	Wheat	endoplasmic reticulum	39.45	37.64
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	8.72	36.54
Zm00001d031532_P001	Maize	plasma membrane	37.61	36.2
Zm00001d005407_P001	Maize	extracellular	22.71	34.74
Zm00001d006052_P004	Maize	endoplasmic reticulum	38.53	34.08
HORVU5Hr1G074800.2	Barley	plastid	39.45	32.33
AT4G30090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	28.21	31.7
Solyc05g010750.2.1	Tomato	cytosol	8.94	30.95
Bra011163.1-P	Field mustard	plasma membrane	25.23	29.97
CDY43554	Canola	plasma membrane	26.61	29.9
CDX68621	Canola	plasma membrane	26.38	29.72
CDY12172	Canola	cytosol	6.65	29.0
Os04t0607150-00	Rice	vacuole	23.62	28.22
TraesCS2D01G428600.1	Wheat	golgi, vacuole	24.31	25.3
TraesCS2A01G430700.2	Wheat	golgi, vacuole	24.54	25.12
TraesCS2B01G451900.1	Wheat	golgi, vacuole	24.08	24.94
KXG27068	Sorghum	plasma membrane	21.79	24.3
HORVU2Hr1G002290.5	Barley	endoplasmic reticulum, extracellular	6.42	23.53
HORVU2Hr1G100500.17	Barley	endoplasmic reticulum, golgi, mitochondrion, nucleus	23.39	22.13
CDX92946	Canola	cytosol	13.07	20.65
Bra001871.1-P	Field mustard	cytosol	12.84	20.36
CDY24314	Canola	mitochondrion	5.73	13.02

Protein Annotations

EnsemblPlants:Solyc07g008970.2.1	EnsemblPlantsGene:Solyc07g008970.2	Gene3D:1.20.120.20	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
ncoils:Coil	PANTHER:PTHR34360	PANTHER:PTHR34360:SF1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF47162
SUPFAM:SSF57997	TMHMM:TMhelix	UniParc:UPI000276B7EA	UniProt:K4CC16	MapMan:35.2	:

Description

No Description!

Coordinates

chr7:-:3992722..3999921

Molecular Weight (calculated)

50657.7 Da

IEP (calculated)

10.507

GRAVY (calculated)

-0.589

Length

436 amino acids

Sequence
(BLAST)

001: MALLKLLLYS FLFLQILTTI SSNGVGDSDA DSSIRLQLDQ LNSKISILES RIDDSTRELR TKDERIKELE NTVDLKLAKL ASLQSELQLF QEKGSLNAKE
101: LVAKANVRAT ELERQIDALR RETDAQNKKK NLLEVSTNEA EKKIQELNLK LESLQRINEG QNARIRKTKR ALQVAEEEMM KAKLDAASVS EQLEEVKKGW
201: LPPWLAVHLV HFRSIVMTYW TEHGRPALDL TLKKALETKS EVVKMAEPHI HSFKTEWIPA MKKRSVEFVR DVGPHIQRLK TKSIHLYHES KKFMEPHIMN
301: AQEVIQPYVK EVRKVADPYV DQVSLVMKPH IDKARILLQP YTKRVHRHYR KAKKTVSLYH HQAQENIHHM LKNHHITKPY ATKELAWYLA SALLALPVIF
401: LLNLVSDFGR KKPKKHSHRH HTSHTRRRAK RAHSDK

Best Arabidopsis Sequence Match ( AT2G24420.2 )
(BLAST)

001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK

Arabidopsis Description

AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.