Factsheet for TraesCS2B01G451900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G428600.1	Wheat	golgi, vacuole	89.55	89.98
TraesCS2A01G430700.2	Wheat	golgi, vacuole	90.26	89.2
HORVU2Hr1G100500.17	Barley	endoplasmic reticulum, golgi, mitochondrion, nucleus	77.67	70.93
Os04t0607150-00	Rice	vacuole	47.03	54.25
KXG27068	Sorghum	plasma membrane	45.37	48.85
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	33.73	32.05
GSMUA_Achr10P...	Banana	endoplasmic reticulum	31.83	30.11
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	31.35	29.73
PGSC0003DMT400076024	Potato	cytosol, nucleus	18.76	29.7
TraesCS5B01G275100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	31.83	29.32
CDY46149	Canola	endoplasmic reticulum, extracellular, plasma membrane	29.93	29.3
CDY20313	Canola	endoplasmic reticulum, plasma membrane, vacuole	29.93	29.3
VIT_04s0008g02720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	31.12	29.18
CDY34774	Canola	endoplasmic reticulum, extracellular, plasma membrane	28.98	28.98
TraesCS7B01G149500.2	Wheat	endoplasmic reticulum	30.88	28.76
AT2G24420.1	Thale cress	endoplasmic reticulum, vacuole	29.93	28.64
CDX72304	Canola	endoplasmic reticulum, plasma membrane, vacuole	28.98	28.05
KRH52641	Soybean	endoplasmic reticulum	29.69	28.03
Solyc08g006030.2.1	Tomato	unclear	29.22	27.77
Bra011260.1-P	Field mustard	endoplasmic reticulum	28.74	27.63
AT4G31340.1	Thale cress	endoplasmic reticulum	28.5	27.46
Bra032096.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	29.22	27.33
CDY28257	Canola	endoplasmic reticulum	28.27	27.17
CDX68735	Canola	endoplasmic reticulum	28.5	27.15
KRH61982	Soybean	endoplasmic reticulum	28.03	27.0
Bra007856.1-P	Field mustard	endoplasmic reticulum, vacuole	28.74	26.48
PGSC0003DMT400038486	Potato	endoplasmic reticulum	28.5	25.86
Solyc08g074290.2.1	Tomato	nucleus	26.6	25.17
Solyc05g010750.2.1	Tomato	cytosol	7.36	24.6
Solyc07g008970.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	24.94	24.08
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	5.94	24.04
CDY12172	Canola	cytosol	5.7	24.0
PGSC0003DMT400073989	Potato	extracellular, plasma membrane, vacuole	24.94	23.7
CDX68621	Canola	plasma membrane	20.67	22.48
Bra011163.1-P	Field mustard	plasma membrane	19.48	22.34
CDY43554	Canola	plasma membrane	20.43	22.16
AT4G30090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	19.95	21.65
Bra024012.1-P	Field mustard	mitochondrion	27.79	18.63
CDY13424	Canola	plasma membrane	27.79	18.14
Bra001871.1-P	Field mustard	cytosol	9.74	14.91
CDX92946	Canola	cytosol	9.74	14.86
CDY67576	Canola	extracellular	3.56	14.85
CDY24314	Canola	mitochondrion	4.99	10.94

Protein Annotations

EnsemblPlants:TraesCS2B01G451900.1	EnsemblPlantsGene:TraesCS2B01G451900	ncoils:Coil	PANTHER:PTHR34360	PANTHER:PTHR34360:SF5	PFscan:PS51257
SignalP:SignalP-noTM	SUPFAM:SSF58113	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2B:+:646017607..646020597

Molecular Weight (calculated)

47282.7 Da

IEP (calculated)

9.341

GRAVY (calculated)

-0.481

Length

421 amino acids

Sequence
(BLAST)

001: MAGDRRALCL VAGAILLCSC FSRAQCGDGQ EQEREIQRLR SKVASLEDEV GWRKEETSQL ESVVRERTAQ IVALVSGLEA MQVRNVADDE SVVKASTNSA
101: MIEKQIERLG SDLEDQVKKG ELLEARASEA EKSLLELGQK LDRVEKINAE QRKKIEELER DLQHSKGKLS EVQRQAKLKA QELANVHGMW LPYWFASRSV
201: HCQELASAKW HLHGKPVLDA LMEKVAETLA HAQRRVEPHL QATKNKLLPV AKFHFNSLKN RTKPYVSVVA DRITTAYRAC KDAIQPCVAK SREFADHYWQ
301: ECRKSSGPHV GRIAAASEPH LSAIEPYTRP VKCVWRQLVM STSLYHSQVQ KGISGFLEGS GLLDPLSAYR LPWWMASAMC ALPMLYAYKI FSATVRKKNQ
401: ARADRGGGTS SDGKHARRVE E

Best Arabidopsis Sequence Match ( AT2G24420.1 )
(BLAST)

001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK

Arabidopsis Description

AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.