Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011260.1-P Field mustard endoplasmic reticulum 97.95 97.95
CDX68735 Canola endoplasmic reticulum 97.72 96.83
AT4G31340.1 Thale cress endoplasmic reticulum 84.7 84.9
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 81.96 82.53
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 66.67 67.91
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 66.44 67.67
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 64.16 66.75
CDY67576 Canola extracellular 12.56 54.46
CDY13424 Canola plasma membrane 79.68 54.11
KRH52641 Soybean endoplasmic reticulum 55.02 54.04
KRH61982 Soybean endoplasmic reticulum 53.65 53.78
PGSC0003DMT400076024 Potato cytosol, nucleus 31.74 52.26
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 51.83 50.56
Solyc08g074290.2.1 Tomato nucleus 50.46 49.66
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 44.75 47.57
Zm00001d029841_P001 Maize cytosol 24.43 47.56
GSMUA_Achr10P... Banana endoplasmic reticulum 48.17 47.42
Solyc08g006030.2.1 Tomato unclear 47.95 47.4
Os09t0497700-01 Rice plasma membrane 47.26 46.41
Os08t0519400-01 Rice plasma membrane 46.58 45.13
PGSC0003DMT400038486 Potato endoplasmic reticulum 47.72 45.04
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 46.12 44.4
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 45.21 43.81
Solyc05g010750.2.1 Tomato cytosol 12.56 43.65
TraesCS7A01G253000.2 Wheat golgi 44.98 43.58
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 43.84 43.24
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 43.38 42.89
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 44.06 42.23
Zm00001d031532_P001 Maize plasma membrane 43.38 41.94
Zm00001d049764_P001 Maize plasma membrane 43.61 41.89
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 43.84 41.83
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 43.38 41.58
Zm00001d005407_P001 Maize extracellular 26.94 41.4
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 43.38 41.39
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 9.59 40.38
Zm00001d024398_P001 Maize cytosol 11.87 39.39
Zm00001d006052_P004 Maize endoplasmic reticulum 42.01 37.32
HORVU5Hr1G074800.2 Barley plastid 42.47 34.96
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 9.36 34.45
Os04t0607150-00 Rice vacuole 26.03 31.23
CDY12172 Canola cytosol 6.62 29.0
CDX68621 Canola plasma membrane 25.57 28.94
CDY43554 Canola plasma membrane 25.57 28.87
TraesCS2D01G428600.1 Wheat golgi, vacuole 27.4 28.64
TraesCS2A01G430700.2 Wheat golgi, vacuole 27.85 28.64
TraesCS2B01G451900.1 Wheat golgi, vacuole 27.17 28.27
KXG27068 Sorghum plasma membrane 24.66 27.62
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 25.8 24.51
CDX92946 Canola cytosol 9.59 15.22
CDY24314 Canola mitochondrion 6.16 14.06
Protein Annotations
EnsemblPlants:CDY28257EnsemblPlantsGene:GSBRNA2T00039993001Gene3D:1.20.5.1230GO:A0A078GSX2GO:GO:0005575GO:GO:0016020
GO:GO:0016021ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF1ProteinID:CDY28257ProteinID:CDY28257.1
SEG:segSignalP:SignalP-noTMSUPFAM:SSF57997SUPFAM:SSF58113TMHMM:TMhelixUniParc:UPI0004EEC71F
UniProt:A0A078GSX2MapMan:35.2::::
Description
BnaA01g05920DBnaA01g05920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSX2]
Coordinates
chrLK032216:+:498830..502763
Molecular Weight (calculated)
49197.0 Da
IEP (calculated)
9.636
GRAVY (calculated)
-0.480
Length
438 amino acids
Sequence
(BLAST)
001: MAAAKLVALL LLTLVFTTTV FADAGEEPEV VDAAGSDGSS KIQLDQLNAK IRALETQIDE KTREVKGKDE LVAEKEKLLK QKEDKIASLQ TEVSSLQGSS
101: DSAKELGKAQ ERVVELEKQV EVLRNFLEQK NKEKASTEAR TKEAEKKLSE VNSSLGKLQK TNEEQKNKIG KLERAIKMAE EEMLRTKLEA TSKAKALLEA
201: HGSWLPPWLA VHWSTFQTYT ETHWEAHGKP VVETVILKVT EAKAQADKWA EPHVETIKTK YIPAVKETVA THVQPHVRTL SIKAKEAYHA SKSAVSPHIV
301: TVQEIVDPYY QEAKKFSKPY VEQVATATKP HVDKIKVTVK PYTTKVVIVY TEFLESATTY HNQVQAHVEQ KLKSHELTEA FATSEFVWFA ASALLALPIF
401: FAYRMLVSLF CTKAKTPVKH PHHHGRRKTK KGHSHVEK
Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)
001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
Arabidopsis Description
AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.