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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 3
  • golgi 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, mitochondrion, nucleus
Any Predictor:endoplasmic reticulum, golgi, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G428600.1 Wheat golgi, vacuole 71.37 78.52
TraesCS2A01G430700.2 Wheat golgi, vacuole 72.02 77.93
TraesCS2B01G451900.1 Wheat golgi, vacuole 70.93 77.67
Os04t0607150-00 Rice vacuole 40.13 50.68
KXG27068 Sorghum plasma membrane 41.65 49.1
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 30.8 32.05
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 26.68 29.85
GSMUA_Achr10P... Banana endoplasmic reticulum 28.42 29.44
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 28.2 29.28
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 26.68 28.6
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 7.38 28.57
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 26.03 28.5
PGSC0003DMT400076024 Potato cytosol, nucleus 16.27 28.2
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 26.25 28.14
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 27.33 28.06
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 26.25 27.5
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 26.46 27.11
KRH52641 Soybean endoplasmic reticulum 26.03 26.91
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 26.46 26.7
AT4G31340.1 Thale cress endoplasmic reticulum 25.16 26.54
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 24.95 26.44
Solyc05g010750.2.1 Tomato cytosol 7.16 26.19
Bra011260.1-P Field mustard endoplasmic reticulum 24.73 26.03
KRH61982 Soybean endoplasmic reticulum 24.51 25.86
CDY28257 Canola endoplasmic reticulum 24.51 25.8
CDX68735 Canola endoplasmic reticulum 24.73 25.79
Solyc08g006030.2.1 Tomato unclear 24.51 25.51
HORVU5Hr1G074800.2 Barley plastid 29.07 25.19
Solyc08g074290.2.1 Tomato nucleus 23.43 24.27
PGSC0003DMT400038486 Potato endoplasmic reticulum 24.3 24.14
CDY12172 Canola cytosol 5.21 24.0
Solyc07g008970.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 22.13 23.39
PGSC0003DMT400073989 Potato extracellular, plasma membrane, vacuole 21.48 22.35
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 4.77 21.15
CDX68621 Canola plasma membrane 17.57 20.93
Bra011163.1-P Field mustard plasma membrane 16.49 20.71
CDY43554 Canola plasma membrane 17.35 20.62
AT4G30090.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 16.92 20.1
Bra024012.1-P Field mustard mitochondrion 24.95 18.31
CDY13424 Canola plasma membrane 24.95 17.83
CDY67576 Canola extracellular 3.47 15.84
Bra001871.1-P Field mustard cytosol 8.03 13.45
CDX92946 Canola cytosol 8.03 13.41
CDY24314 Canola mitochondrion 3.9 9.38
Protein Annotations
EnsemblPlants:HORVU2Hr1G100500.17EnsemblPlantsGene:HORVU2Hr1G100500ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF5PFscan:PS51257
SEG:segSignalP:SignalP-noTMSUPFAM:SSF58113UniParc:UPI0002951A77UniProt:M0VUK1MapMan:35.2
Description
No Description!
Coordinates
chrchr2H:-:691494143..691496718
Molecular Weight (calculated)
51812.4 Da
IEP (calculated)
9.477
GRAVY (calculated)
-0.457
Length
461 amino acids
Sequence
(BLAST)
001: MLDRSAGGMG GDRRALSLTI AGAILLCSCF ARVRCGDEHE QEQEIQRLRS KVASLEDEVG WRKDETSQLE SVVRERTAQI AALVGGLEAM QVRNVADDES
101: VVKASTNSAM IEKQIERLGS DLEDQVKKGE LLEARASEAE KSLLELGQKL DRVEKINAEQ RKKIEELEQD LQHSRGKLSE MQRQAKLKAR ELANVWVHGM
201: WLPYWFASRS VHCQELASAK WHLHGKPVLD ALMEKVAETL AHAQALVEPH LQATKNKLVP VAKVHFNSLK SSTKPYVSSV AARITTAYRA CEDAIQPCVV
301: KSQEFADHYW QECRKFSGPH VARITAASEP HLSALEPYTR PVKSVWRQLV MATSMYHTQV QKGISGFMEG SELLDPLSAR RLAWWMVIKM LCSTSTAQIN
401: STMLTELTPV CCVFRRRPPC SGCRCCTPTR SAQPPSARKF RRRDLRGGGR SSNRRRARRV D
Best Arabidopsis Sequence Match ( AT2G24420.1 )
(BLAST)
001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK
Arabidopsis Description
AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.