Factsheet for Bra024012.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13424	Canola	plasma membrane	99.84	97.21
AT4G31340.1	Thale cress	endoplasmic reticulum	55.1	79.18
Bra011260.1-P	Field mustard	endoplasmic reticulum	55.1	79.0
Bra032096.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	44.59	62.22
Bra007856.1-P	Field mustard	endoplasmic reticulum, vacuole	42.36	58.21
KRH52641	Soybean	endoplasmic reticulum	36.47	51.35
KRH61982	Soybean	endoplasmic reticulum	35.67	51.26
PGSC0003DMT400076024	Potato	cytosol, nucleus	21.66	51.13
VIT_04s0008g02720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	35.83	50.11
Solyc08g074290.2.1	Tomato	nucleus	33.92	47.87
Solyc08g006030.2.1	Tomato	unclear	33.12	46.95
HORVU7Hr1G052350.1	Barley	cytosol, plasma membrane	30.57	46.6
Zm00001d029841_P001	Maize	cytosol	16.4	45.78
Os09t0497700-01	Rice	plasma membrane	32.01	45.07
PGSC0003DMT400038486	Potato	endoplasmic reticulum	33.12	44.83
GSMUA_Achr10P...	Banana	endoplasmic reticulum	31.69	44.72
Os08t0519400-01	Rice	plasma membrane	31.21	43.36
KXG25592	Sorghum	endoplasmic reticulum, golgi, plasma membrane	31.05	42.86
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	7.01	42.31
TraesCS7B01G149500.2	Wheat	endoplasmic reticulum	30.41	42.26
TraesCS7A01G253000.2	Wheat	golgi	30.25	42.04
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	29.62	41.89
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	29.3	41.53
TraesCS5B01G275100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	29.78	40.92
TraesCS5A01G275800.2	Wheat	endoplasmic reticulum	29.46	40.48
Solyc05g010750.2.1	Tomato	cytosol	8.12	40.48
Zm00001d049764_P001	Maize	plasma membrane	29.3	40.35
Zm00001d005407_P001	Maize	extracellular	18.31	40.35
Zm00001d031532_P001	Maize	plasma membrane	28.82	39.96
TraesCS5D01G283100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	29.14	39.87
OQU89720	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	28.66	39.22
Zm00001d006052_P004	Maize	endoplasmic reticulum	27.71	35.29
HORVU5Hr1G074800.2	Barley	plastid	29.62	34.96
Zm00001d024398_P001	Maize	cytosol	7.32	34.85
HORVU2Hr1G002290.5	Barley	endoplasmic reticulum, extracellular	6.53	34.45
Os04t0607150-00	Rice	vacuole	17.99	30.96
TraesCS2D01G428600.1	Wheat	golgi, vacuole	18.63	27.92
Bra011163.1-P	Field mustard	plasma membrane	16.24	27.79
TraesCS2B01G451900.1	Wheat	golgi, vacuole	18.63	27.79
TraesCS2A01G430700.2	Wheat	golgi, vacuole	18.79	27.7
KXG27068	Sorghum	plasma membrane	15.76	25.32
HORVU2Hr1G100500.17	Barley	endoplasmic reticulum, golgi, mitochondrion, nucleus	18.31	24.95
Bra001871.1-P	Field mustard	cytosol	7.32	16.73

Protein Annotations

EnsemblPlants:Bra024012.1	EnsemblPlants:Bra024012.1-P	EnsemblPlantsGene:Bra024012	Gene3D:1.20.5.1230	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:DUF599	ncoils:Coil	PANTHER:PTHR34360	PANTHER:PTHR34360:SF1	PFAM:PF04654
SEG:seg	SUPFAM:SSF58113	TMHMM:TMhelix	UniParc:UPI0002540F0F	UniProt:M4E5F8	MapMan:35.2

Description

AT4G31340 (E=2e-185) | myosin heavy chain-related

Coordinates

chrA03:+:28225346..28231989

Molecular Weight (calculated)

70990.8 Da

IEP (calculated)

8.654

GRAVY (calculated)

-0.186

Length

628 amino acids

Sequence
(BLAST)

001: MVYATYHVYL WYKLRTQPLT TIIGTNARAR RFWVASIIKD NEKKNILAVQ TLRNCIMGST LMATTSILLC AGLAAVISST YAVKKPLNDA VYGAHGEFMV
101: ALKYVTILTI FLFSFFSHSL SIRFINQVNI LINTPFPPEE LDEEMMVTPE EYVAELLERG FVLNTVGNRL FYAALPLMLW IFGPVLVFLC SVMMPPSSWL
201: CYFFLPLFSP PPLSSPEEPE IVDAAGSDGS SKIQLDQLNA KILALESQVD EKAREVKGKD DLVAEKEKLL KAKEDKIASL QTEVSSLQGT SDSAKQLGKV
301: QARVVELEKQ VEVLRNFLEQ KNKEKTCTEA LTKEAEKKLT ELNSSLDELE KTNEEQMKKI GKLERAIKIA EEEILRTKHE ASSKTNELLE AHGSWLPPWL
401: AVHWISIQAY TETHWEAHGK PAVDTVILKV TEAKTQAVKW AEPHVKNAKT KYIPAIKETV ATHVEPHVRT LSIKAKEAYH ASKSAVSPHI VTVQEIVDPY
501: YQEAKKFSKP YVDQVVTATK PHVDNVKVSM KPYTTKVIIV YTEFLESATT YHNQVQAHVE QRLKSHELTE AFATNEFVWF AASALLALPI FFAYRVLSSL
601: FCTKTKKAVQ HPHHHGRRKT KRSHHSDK

Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)

001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK

Arabidopsis Description

AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.